Comamonas terrigena: CT3_31520
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Entry
CT3_31520 CDS
T09012
Symbol
hmsH
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
ctez
Comamonas terrigena
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
ANAPC3
Motif
Other DBs
NCBI-ProteinID:
BBL25697
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Position
3501620..3503932
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AA seq
770 aa
AA seq
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MHIRSASSPFLQRVPRAISVAVLVTCLGSAALAQTPSAPAARDQLLQLAQQKRDAQQWDE
ALAYYRQGRAQYPRDTAFQYGEIYVLTDSGQQAQASALADGVLRQAPDSADALLVKAYTQ
LRQNGSFAALEYVDRAQQIAPGQGYVLREYIFALQRAGMAHQALELAARQPGLLTPAQFR
TLQADEAAEWVRFSRVTARSEAERFAVADQALARYDALLAQWAAQGPETAPLIQQARIDR
LQALHSRAYMSELVREYEDLQAAGVDIPVFALGDVASAYLYLRQPEQAEAIYRKLAASGY
MRNDDQARLAQDQGLLYAYTDQDRLAEAQQHVRAMQQDYAKWRYVEGEKSNVPNESYLEV
QHTAIMVDLYANDLAGGQARLKDLVDAAPWNNSLRTDLAWAYRMRGWPRLAEQELKIAEG
YEPRDLNVETHQGQTALVLQEWRQAELLSADTIGRFPEAPSAKRLARAWEVHNMAELQVS
GYKGLSRGGSNGDGNPVFGSRDFGLETTLYTPPLNYNWRLFAGAGHRTGNFPEGKGQQNF
GRVGLEWRSRDWWAEAEVSSSSFGQGSKTGARVAAAYDIDDHWQLSAAANWRSRATPLRA
LHNGITSNSVELGLRWRQSELREWSVGITPSRFSDGNHRTELLVTGKERLLTRTTWFLDL
GIEGYAARNSRTDVPYYSPRREVGLMPSLQWNHTIYQRYETQWTQKASIGLGGVHQQGYG
TGAAQFISYGQRYKHNDVLEMGATLSVLRRPYDGVHEREWRLVFDLTYRF
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcacatacgctctgcatccagccctttcctgcagcgagtgccccgggccatttctgtc
gccgtgctggtgacctgcctgggcagcgccgcactggcacaaacgccctccgccccggct
gcccgggaccagttgctgcagctggcgcagcaaaagcgggacgcccagcagtgggacgaa
gcgctggcgtactaccgccagggccgtgcgcaatacccccgggacacggccttccagtat
ggcgagatctatgtgctgaccgacagcggccagcaggcgcaggccagtgccctggccgat
ggcgtgctgcgccaggcccctgacagtgccgacgccctgctggtcaaggcctatacgcag
ctgcgacaaaacggcagctttgcggccctggaatatgtcgaccgggcgcagcagatcgcc
cccggccagggctatgtgctgcgtgaatacatttttgcgctgcagcgggcgggcatggcc
caccaggcactggaactggccgcgcgccagcccggcctgcttacccccgcccagttccgt
accctgcaggccgatgaagcggccgagtgggtgcgcttttcccgcgttaccgcccgcagc
gaagccgagcgcttcgcggtcgccgaccaggccctggcacgctacgacgcactgctggcg
caatgggcggcacagggcccggagacggcgccgctgatccagcaggcacgcatcgaccgg
ctgcaggccctgcattcacgcgcctacatgtccgagctggtgcgggaatacgaagacctg
caggccgcgggcgtggacatcccggtcttcgccttgggtgatgtggcatcggcctatctc
tacctgcgccagcccgaacaggccgaagcgatctaccggaaactggcggcatccggctat
atgcgcaacgacgaccaggcacgtctggcccaggaccaggggctgctgtacgcctatacc
gaccaggaccggctggccgaagcacagcagcatgtgcgcgccatgcagcaggactatgcc
aagtggcgctatgtggaaggcgaaaaatccaatgtgcccaacgagtcctatctggaagtg
cagcacaccgccatcatggtggacctgtatgccaacgacctggcgggcgggcaggcccgg
ctcaaggatctggtggatgccgctccctggaacaacagcctgcgcaccgacctggcctgg
gcctaccgcatgcggggctggccgcgcctggccgagcaggaactgaagattgccgaaggc
tacgagccgcgcgacctgaatgtggaaacccaccagggccagacggcgctggtgctgcag
gaatggcgccaggccgagctgctgagcgccgacaccattggccgctttccggaagctccc
tccgccaagcgcctagcccgcgcctgggaggtccacaacatggcggaactgcaggtttcc
ggctacaaggggctgagcaggggcggcagcaacggcgacggcaaccccgtgttcggcagc
cgcgacttcgggctggagaccacgctctacaccccgccgctgaactacaactggcgtctg
tttgcaggggcgggacaccgcaccggcaacttccccgaaggcaaggggcaacagaacttc
ggccgtgtcggcctggagtggcgcagccgcgactggtgggccgaggccgaagtctccagc
agcagcttcgggcagggctccaagaccggggcacgcgtggcggcggcctatgacatcgac
gaccactggcaactgagcgctgcggccaactggcgctcccgtgccacaccgctgcgcgcc
ctgcacaacggcatcaccagcaacagtgtggaactgggcctgcgctggcgccaaagcgag
ctgcgggagtggagcgtcggcatcaccccgtcgcgcttcagcgatggcaaccaccgcacc
gagctgctggtcaccggcaaggaacgcctgctgacccgcaccacctggttcctggacctg
gggatcgagggctacgcggcgcgcaactcccgcaccgatgtgccgtactacagcccgcgc
cgtgaagtggggctgatgccttcgctgcaatggaaccacacgatctaccagcgctatgaa
acgcaatggacccagaaagccagcatcggcctgggtggggtgcaccagcagggctatggc
acgggcgccgcgcaattcatcagctacgggcagcgctacaagcacaacgatgtgctggag
atgggggccacgctgtctgtactgcgccgcccctatgacggggtgcatgagcgcgaatgg
cgtcttgtgtttgatctgacttaccgattctga
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