Comamonas terrigena: CT3_34670
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Entry
CT3_34670 CDS
T09012
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ctez
Comamonas terrigena
Pathway
ctez03030
DNA replication
ctez03410
Base excision repair
ctez03420
Nucleotide excision repair
ctez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CT3_34670 (polA)
03410 Base excision repair
CT3_34670 (polA)
03420 Nucleotide excision repair
CT3_34670 (polA)
03440 Homologous recombination
CT3_34670 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctez03032
]
CT3_34670 (polA)
03400 DNA repair and recombination proteins [BR:
ctez03400
]
CT3_34670 (polA)
Enzymes [BR:
ctez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CT3_34670 (polA)
DNA replication proteins [BR:
ctez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CT3_34670 (polA)
DNA repair and recombination proteins [BR:
ctez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CT3_34670 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CT3_34670 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BBL26012
LinkDB
All DBs
Position
complement(3852918..3855722)
Genome browser
AA seq
934 aa
AA seq
DB search
MSNSKTLVLVDGSSYLYRAYHAMPDLRAVPGDPASPATGAIRGMVNMMQALRKDVQADYA
VCVFDTSGPTFRDAMYDQYKATRSPMPDDLRSQIEPIHEVVQLLGWKVVAVPGVEADDVI
ATLAQTAAAQGINVIVSSGDKDLSQLVNEHVTIIDTMNGKKRDIAGVTAEFGVPPAQMID
YQALVGDTVDNVPGVTKVGPKTAAKWLEEYGSLDNLIANAAAIKGVAGQNLRDAIASGQL
ALSRQLVTMKTDCDLSGHVAGLPQLDSITLGEPDNAGLAPFYEKYGFKGLVRALGAVAAE
ATATKKSAPASPQGGLFDADDAATTEIAVEAQQRDVVYTTILTEDALDHWLAKLQAAELA
ALDTETDSLDEMVAQIVGISFSVAVGEAAYIPLRHEGMDVPEQLDMALVLAKLKPWLEDA
SKKKLGQHVKYDQHVFANHGITVRGYAHDTMLQSYVLEADRPHNLTSLALRHVNRTGISY
EDLCGKGKNQIPFAQVSVDKAAAYSCEDSDQTLDVHGVLWPRIQAHAGLLHIYELEIQTS
EALFRIERNGVRIDAGELARQSNDLGARILKLEEDAYEIAGQPFNLSSPKQLGEIFFDKL
GMPVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYTDKLAQMALPSDGR
VHTHYAQAVAVTGRLSSNDPNLQNIPVRTPEGRRVREAFVAPEGKLIASADYSQIELRIM
AHLSGDEALLNAFRDGLDVHRATAAEVFGVSVDAVSSEQRRYAKVINFGLIYGMSSFGLA
KNLGIETKAAAAYIDKYFQRYPGVKRYMDQTVELAHAQGYVETVFGRRLVLPEINGGNGP
RKKAAERAAINAPMQGTAADLIKKAMVAVQAKLDAEKPEVKVIMQVHDELVFELPASEKD
WVRAEIPVLMAGVADLAVPLLAEIGFGPNWEKAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattccaagacattggtgctggtggacggttccagctacctctaccgcgcctac
catgccatgcccgacctgcgggccgttcccggcgacccggccagcccggccacgggtgcc
atccgcggcatggtcaacatgatgcaggcgctgcgcaaggatgtgcaggccgactacgcc
gtctgcgtgttcgacaccagtggtcctaccttccgcgacgccatgtacgaccagtacaag
gccacgcgctcgccgatgcccgacgatttgcgcagccagatcgagcccatccacgaggtg
gtgcagctgctgggctggaaggtggtggccgtgcccggcgtggaggcggatgacgtgatt
gccaccctggcgcagacagcggcggcacagggcatcaatgtgatcgtctccagcggcgac
aaggacctgagccagctggtgaacgagcatgtgaccatcatcgacaccatgaacggcaaa
aagcgcgacatcgccggcgtgacggccgagttcggcgtgccgcccgcccagatgatcgac
taccaggccctggtgggcgacaccgtggacaacgtgcccggcgtgaccaaggtgggcccc
aagactgcggccaagtggctggaagagtatggctcgctggacaatctgatcgccaatgcg
gcggcgatcaagggcgtggccggccagaacctgcgcgatgccatcgccagcggccagttg
gcgctgagccgccaactggtgaccatgaagaccgattgcgacctttccgggcatgtggcc
ggcctgccgcagctggacagcatcaccctgggcgagcccgataacgccggtctggcgcct
ttctacgaaaaatacggtttcaagggtctggtgcgcgcgctgggtgcggtggcggcggaa
gccacagctaccaagaagtccgctcccgcatccccgcaaggcggtctgttcgatgcggat
gacgccgccaccaccgaaatcgcggtcgaagcccagcagcgagatgtggtctataccacc
atcctgaccgaggacgcgctggaccactggctggccaagctccaggcggccgagttggcg
gcactggacaccgagaccgattcactggatgaaatggtcgcccagattgtgggtatcagc
ttcagcgtggccgtgggcgaagcggcctacattccgctgcgccacgaaggcatggatgtg
cccgagcagctcgatatggcgctggtgctggccaagctcaagccctggctggaagatgcc
tcgaagaagaagctgggtcagcatgtcaaatacgaccagcatgtgtttgccaaccatggc
atcaccgtgcgcggctacgcgcacgacaccatgctgcagtcctatgtgctggaggccgac
cgtccccacaacctgaccagcctggcactgcgccatgtgaaccgcaccggcatcagctac
gaagacctgtgcggcaagggcaagaaccagatcccgtttgcccaggtgagtgtggacaag
gcggcggcgtacagctgcgaagattccgaccagacgctggatgtgcatggcgtgctgtgg
ccgcgcatccaggcccatgccggcctgctgcacatctatgaattggaaatacagaccagc
gaggcgctgttccgcatcgagcgcaatggcgtgcgcatcgacgctggcgagctggcgcgg
cagagcaacgatctgggggcgcgcatcctcaagctggaggaagatgcgtacgagatcgca
ggccagcctttcaacctgtcatcgcccaagcaactgggcgagatcttcttcgacaagctg
ggcatgccggtggtcaagaagaccgccaccggtgcgcgcagcaccgatgaggaagtgctg
gaaaagctggccgaggactacccgctgcctgccaagctgctggagcaccgcagcctgtcc
aagctcaagggcacctacaccgacaagcttgcccagatggccttgcccagcgatggccgg
gtgcacacgcactacgcccaggcggtggcggtgacggggcgcctgtccagcaatgacccg
aatctgcagaacattccggtgcgcacaccggaaggccgcagggtgcgcgaagcctttgtc
gcgcccgagggcaagctgattgccagtgccgactattcgcagatcgagttgcgcatcatg
gcccacctctccggggatgaagccctgctcaatgccttccgggacggtctggacgtgcac
cgtgccacggcggccgaggtgtttggcgtcagcgtcgatgccgtcagcagcgagcagcgc
cgctacgccaaggtcatcaatttcggcctgatctacggcatgagcagctttggcctggcc
aagaacctgggcatcgagaccaaggccgccgcggcctacatcgacaaatacttccagcgc
taccccggcgtgaagcgctacatggaccagaccgtggagctggcccatgcccagggctat
gtggagactgtgttcggacgccgcctggtgctgcccgagatcaatggcggcaacggcccg
cgcaagaaagcggccgagcgcgctgccatcaacgcgcccatgcagggcacggcggcggac
ctgatcaaaaaggccatggtggctgtgcaagccaagttggatgccgaaaagcccgaggtc
aaggtcatcatgcaggtgcacgatgaactggtgttcgagctgcccgcgtcggaaaaagac
tgggtccgggcggaaatcccggtactgatggcgggggtggccgacctggccgtgccgctg
ctggcagagatcggttttgggccgaactgggaaaaggcgcactga
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