Comamonas terrigena: CT3_35340
Help
Entry
CT3_35340 CDS
T09012
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ctez
Comamonas terrigena
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctez03016
]
CT3_35340
Enzymes [BR:
ctez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CT3_35340
Transfer RNA biogenesis [BR:
ctez03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CT3_35340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BBL26079
LinkDB
All DBs
Position
3936065..3938140
Genome browser
AA seq
691 aa
AA seq
DB search
MHALFEDAGKFLAGRILSEAESSSQIELGTGKRVKVKAANILLKFEKPEPAALMAEAEAI
AVTVELDLAWEFAPEEEFGFADIARDYFSDNAPLAQQAGMLFALYGAPHYFRRAGKGRFK
KAPAEILQQALAAIEKKKLLQAQIDGWAQELVAGTCPQPIREQLYKILFRPDKNAPEYKA
VVEASRNAQKAPLDLLQTAGAIDSAYQFHWQRFLFDNFPKGTGFPAITAPQPPADLPLAD
VQAYSIDDSMTTEIDDALSVQGLGSGKVTLGIHIAAPGLAIQPGSELDKLGRNRLSTVYM
PGYKITMLPDEVVRIYTLDEGRANPAVSLYVTYDETTFEVLAKETRLERVPVVTNFRHDK
LDHIVTEEWLSDSSLEVENTPANLLAVRDQLSFLHKLARHLKAEREVVRGKPENFSRPDY
TFRLEGNGDGEPNGSEKVSITVRKRGAALDLIVAEAAIVANSSWGLMLAEHGVPGIYRSQ
ASLAPGVKVRMSTKALPHAGIGVKAYSWATSPLRRYTDLVNQWQIIACARHGATAALAAP
FKPKDAELFGIISSFDGAYSAYNGYQAGMERFWTLKYLEQNGITELEAAVIKDNGPAGML
VRADTLPLVISVLGAQNLPRGARIRVKLGEIDEITLDIHGTVLERLDDPDDTSDDAPVDE
VSEEDDNVAGPIAIAVDVNDSEGASADNPAP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcattgtttgaagacgccggcaaattcctggctggccgtatcctgtccgaggcc
gagtcctcctcccaaatcgagcttggcaccggcaaacgggtcaaggtcaaggctgccaac
atcctgctgaagttcgaaaagcccgagccggcagcactgatggccgaggccgaagccatt
gccgtcaccgtggagctggacctggcctgggaattcgcccccgaagaagagttcggcttt
gccgacattgcgcgcgactatttctccgacaacgcgccgctggcccagcaggccggcatg
ctgttcgcgctgtatggcgccccccactacttccgccgcgccggcaagggccgcttcaag
aaggcgccggccgaaatcctgcagcaggccctggccgccatcgagaagaaaaagctgctc
caggcccagatcgacggctgggcgcaggaactggtggctggcacctgcccgcagccgatc
cgcgagcagctctacaagatcctgttccgccccgacaagaacgcccccgaatacaaggcc
gtggtcgaggccagccgcaatgcccagaaagcaccgctggacctgctgcagacggccggc
gccatcgactcggcctaccagttccactggcagcgctttctgttcgacaacttccccaag
ggcacgggcttcccggccatcaccgccccccagccgccggccgatctgccgctggccgat
gtgcaggcctattccatcgacgattcgatgaccaccgaaatcgacgatgccctgtccgtc
cagggtctgggcagcggcaaggtcacgctgggcatccacattgccgcgccgggtctggcc
atccagcccggctccgagctggacaagctgggccgcaaccgcctgtccacggtctacatg
cccggctacaagatcaccatgctgccggacgaggtggtgcgcatctacacgctggacgaa
ggccgtgccaaccccgccgtgtcgctgtatgtgacctatgacgaaaccacgttcgaggtg
ctggccaaggaaaccaggctggaacgcgtgccggtggtgaccaatttccgccacgacaag
ctggaccacatcgtcaccgaggaatggctgagcgacagcagcctcgaggtcgagaacacc
cccgccaacctgctggccgtgcgcgaccagctgtcctttctgcacaagctggcgcgccac
ctcaaggccgagcgcgaagtggtgcgcggcaagcccgagaacttctcgcgccccgactac
accttccgcctggaaggcaatggcgacggcgagcccaacggcagcgaaaaggtcagcatc
accgtgcgcaagcgcggtgccgcgctggacctgatcgtggccgaggccgccatcgtcgcc
aacagcagctggggcctgatgctggccgagcacggcgtgcccggcatctaccgcagccag
gccagcctggccccgggcgtgaaggtgcgcatgtccaccaaggccctgccccacgccggc
atcggcgtgaaagcctattcctgggccacctcgccgctgcgccgctacaccgacctggtg
aaccagtggcagatcattgcctgcgcccgccacggcgccacggccgcactggctgcaccg
ttcaagcccaaggatgccgagctgttcggcatcatcagcagctttgatggcgcctacagt
gcctacaacggctaccaggccggcatggaacgcttctggacgctgaagtacctggaacag
aacggcatcaccgaactggaagccgcagtcatcaaggacaacggccccgccgggatgctg
gtgcgcgccgacacgctgcccctggtgatctcggtgctgggcgcgcaaaacctgccgcgt
ggcgcccgcatccgcgtgaagctgggcgagatcgacgagatcacgctggacatccacggc
acggtgctggagcgcctggacgacccggatgacaccagcgacgacgcaccggtggacgag
gtgtcggaagaagacgacaacgtggccggcccgatcgccattgccgtggatgtaaacgac
agcgaaggcgccagcgccgataatcccgctccgtga
DBGET
integrated database retrieval system
