Comamonas terrigena: CT3_35650
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Entry
CT3_35650 CDS
T09012
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ctez
Comamonas terrigena
Pathway
ctez00300
Lysine biosynthesis
ctez00470
D-Amino acid metabolism
ctez01100
Metabolic pathways
ctez01110
Biosynthesis of secondary metabolites
ctez01120
Microbial metabolism in diverse environments
ctez01230
Biosynthesis of amino acids
Module
ctez_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CT3_35650 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CT3_35650 (dapF)
Enzymes [BR:
ctez01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CT3_35650 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
BBL26110
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All DBs
Position
complement(3969458..3970333)
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AA seq
291 aa
AA seq
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MHIRFTKMQGAGNDFVVLDETQGRLGLTAAQYRFLADRHFGVGADQILTVRPSPADGVDF
EYVIHNADGGEVEQCGNGSRCFARFVYDKGLTDKTTIRVQTLSGVIAPQLTPDGRVTVDM
GLPVLDAPRVPFDASGLAAATRHRAQVWPLALAAPAPAQVEVVVVSMGNPHAVQLVDDVD
QFPVAVVGPQVERHVRFPQRVNAGFLQVQNRAQTKLRVYERGSGETLACGTGACAAVVAG
IQQGLLDARVDVQTRGGLLTIAWEGGAQDHVFMTGPATTVFEGQIEIPDAL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcacattcgcttcaccaagatgcagggcgcgggcaacgactttgtcgtgctcgacgag
acgcaaggccgcctgggcctgacggcggcgcagtaccgctttctggcggaccgccatttc
ggcgtgggcgccgaccagatcctgacggtgcgcccttcgcccgccgacggcgtggatttt
gaatacgtgatccacaacgccgacggcggtgaggtggagcagtgcggcaacggctcgcgc
tgctttgcccgctttgtgtatgacaagggcctgaccgacaagaccaccatccgcgtgcag
acgctcagcggggtgatcgcgccccagctcacaccggatggccgcgtcaccgtggacatg
ggcctgccggtgctggatgccccgcgcgtgcccttcgacgccagcgggctggcggcggcc
acgcgccaccgggcccaggtctggccgctggcgctggcggcaccggcgcccgcccaggtc
gaggtggtggtggtctccatgggcaatccgcacgcggtgcagctggtggacgatgtcgac
cagttccccgtggcggtggtgggcccgcaggtggagcgccatgtgcgttttccgcaacgc
gtgaacgcgggctttctgcaggtgcaaaaccgcgcgcagaccaagctgcgcgtctatgaa
cgtggctcgggcgagaccctggcctgcggcaccggcgcctgcgcggccgtggtcgccggc
attcagcagggtttgctggatgcgcgtgtcgatgtacaaacccgggggggcttgctgacg
atcgcctgggagggcggcgcgcaagaccatgtgttcatgaccggcccggccaccacggtg
ttcgaaggccagatcgagattcctgacgctttatga
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