Comamonas terrigena: CT3_38760
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Entry
CT3_38760 CDS
T09012
Name
(GenBank) TonB dependent/Ligand-Gated channel TonB
KO
K02014
iron complex outermembrane recepter protein
Organism
ctez
Comamonas terrigena
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctez02000
]
CT3_38760
Transporters [BR:
ctez02000
]
Other transporters
Pores ion channels [TC:
1
]
CT3_38760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BBL26421
LinkDB
All DBs
Position
complement(4337372..4339549)
Genome browser
AA seq
725 aa
AA seq
DB search
MSPSHRTLFPAARSGLLSPHVLALAGVLGLSATVARAQDEPTTTLKEVTVRSAQDVQTLP
APAAGGQVAKGAGLGLLGNRDVMDAPFNITSYTQQVIADQQSATVAAVLENDPSVRFTTN
AGHAYENYTIRGLEVNSSDVSLNGLYGMAPDGHIPTEMLERVEVLKGPGALLNGMAPGGA
VGGVVNVVTKRPTADDRTQLTTSFATGSQFGVHADVSRRFGEERRLGIRVNGSMASGETD
VDDQKRRKRLGALAMDYQGDRWTLGLDAYSYRSTIANGSPLMVGFATVGHMVAAPDASLN
QFRGMQAEQQSDGVMLRGTAELNDAWSVYGSLGWAEHEYTGMLNGTRGILQKDGHTLNTQ
TYNQYGYTKNLTGDVGVRGKFRTGAVAHELVLSMNQLRQEGGRGLNAKGGVPSASYVSDL
YAPSDKVVFSSEATAYKQEKDNVITSYAVADTLNMLDGKLAVTAGLRLQQVEQKMAGYDA
QATTPMLGIVAKPWGGHLSLYANYIEGLSAGTTVAAGYANAGETLKPYQTKQMEAGVKWQ
NAGLTHTFSLFQISKPSAISVTRVGDTLPTLVDDGEQRNRGAEWTVSGKLASAWTLLGGV
AYTQAKQTKTQGGSKDGLDMYGVPRWTANLGADYAVAAVPGLAVSGRMVYTGTQWVNSSN
TIQAPSWTRFDAGVRYATRMGGKPVTLRANLQNLFDRQYWAGAFADNFMTVGAPRTLRLS
ATVDF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttcgcatcgcaccctgttccccgctgcgcgcagcggcttgctgtctccccat
gtcctggccttggccggtgtgctgggcctgagtgccaccgtcgcacgggcccaggacgag
cccaccaccacgctcaaggaagtcaccgtgcgttcggcacaggatgtgcagacgctgcct
gccccggcggcaggggggcaggtggccaagggcgccggcctgggtctgctgggcaaccgc
gatgtgatggatgcaccgttcaacatcaccagctacacccagcaggtgattgccgaccag
cagagcgccacggtggcggcggtgctggaaaacgacccctcggtgcgcttcaccaccaat
gccggtcacgcctacgaaaactacaccatccgcgggctggaggtgaattccagcgatgtc
tctctcaacggcctgtacggcatggcgcccgacgggcacattcccaccgaaatgctggag
cgtgtcgaagtcctcaagggcccgggcgcgctgctcaacggcatggcgccgggcggcgcc
gtgggcggtgtcgtgaatgtggtgaccaagcgtcccacggccgatgaccgcacacagctg
accacctcgttcgccacgggttcgcagttcggtgtgcacgccgacgtgtccagacgcttt
ggggaagagcgccggctcggcatccgtgtcaacggcagcatggccagcggtgaaaccgat
gtcgacgaccagaagcgccgcaagcgcctgggtgcgctggcgatggactaccagggcgat
cgctggacgctggggctggacgcctacagctaccgctccaccatcgccaatggcagcccg
ctgatggtgggctttgccacggtgggccatatggtggccgcgccggatgcctcgctgaac
cagttccgcggcatgcaggcggagcagcaaagtgacggcgtgatgctgcgcggtacggcc
gagctgaacgacgcctggagcgtgtacggcagcctgggctgggccgagcacgaatacacc
ggcatgctcaacggcacgcgcggcattctgcaaaaagacggccacacgctgaacacccag
acctacaaccagtatggctacaccaagaacctcaccggggatgtgggggtgcgcggcaag
ttccgcaccggcgcggtggcgcatgaactggtgctgtccatgaaccagctgcgccaggaa
ggcgggcgtggcctgaatgccaagggcggcgtgccgtcggccagctatgtgagcgatctg
tatgcgcccagcgacaaggtggtgttcagcagcgaggcgaccgcctacaagcaggaaaag
gacaacgtcatcaccagctatgccgtggccgacacgctgaacatgctcgatggcaagctc
gccgtcaccgccggtctgcgcctgcagcaggtggagcagaagatggctggctacgacgcc
caggccaccacgcccatgctgggcattgtggccaagccctggggagggcatctgtcgctg
tacgccaactacatcgaaggcctgagcgcaggcaccaccgtggccgccgggtacgcgaat
gctggcgagaccctgaagccctaccagaccaagcagatggaggccggggtcaagtggcag
aacgccgggctgacgcacaccttctctctgttccagatcagcaagccctccgccatttcg
gtgacccgcgtgggggatacgctgcccacgctggtggatgacggcgagcagcgcaaccgc
ggtgcggagtggaccgtgtcgggcaagctcgcatccgcgtggacgctgctgggtggcgtg
gcctacacccaggccaagcagaccaagacccagggcggcagcaaggacgggctggacatg
tatggcgtgccgcgctggacggcgaatctgggggccgactatgccgtggccgccgtgccg
gggctggcggtcagcggccgcatggtctacaccggtacgcagtgggtcaattccagcaac
accatccaggcgcccagctggacgcgttttgacgccggggtgcgctatgccacccgcatg
ggcggcaagcccgtcaccctgcgcgccaacctgcagaatctgtttgaccgccaatactgg
gcgggggcattcgccgacaacttcatgaccgtgggtgcaccgcgcacgctgcgtctgtcg
gccacggtggacttctga
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