Comamonas terrigena: CT3_38820
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Entry
CT3_38820 CDS
T09012
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ctez
Comamonas terrigena
Pathway
ctez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CT3_38820 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctez03400
]
CT3_38820 (ung)
Enzymes [BR:
ctez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CT3_38820 (ung)
DNA repair and recombination proteins [BR:
ctez03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CT3_38820 (ung)
Prokaryotic type
CT3_38820 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBL26427
LinkDB
All DBs
Position
complement(4344819..4345538)
Genome browser
AA seq
239 aa
AA seq
DB search
MSDASAGTATQLESANPSDWAVAPGWQAAVDAFFFSPSGQQLLDYLQQRLDAGAVVFPPQ
PLRALELTAPEDVRVVILGQDPYHGRGQAEGLAFSVASGVRLPPSLQNIFKEIQRDLGAP
FPPFPQPGGSLVKWAQNGVLLLNTCLTVEEGQAASHSKRGWELLTDAIIRQVAEQGRPTV
FMLWGSHAQSKRLLIPQDRGHLVLMSNHPSPLSALRPPVPFIGNGHFGQAKRFRETHGY
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcaagcgctggaacagcaacgcaactggaaagcgccaatcccagcgactgg
gccgtggcgcctggctggcaggcggcggtggatgcgttcttcttctcgccctccggccag
cagttgctggactatctgcagcagcgcctggatgcgggtgcggtggtgtttccaccgcag
ccgctgcgtgcactggagttgaccgcgcccgaggatgtgcgggtggtcattctggggcag
gacccctaccatgggagaggacaggccgaagggttggcgttttccgtggccagcggcgtg
cggctgccgccttcgctgcagaacatcttcaaggaaatccagcgcgacctgggtgcgcca
tttcccccattcccgcaacccggtggcagcctggtgaagtgggcacagaacggtgtgctg
ctgctcaacacctgcctgaccgtggaagaaggccaggccgccagccacagcaagcgcggc
tgggagctgctgactgatgccatcatccgtcaggtggccgaacagggcaggcccacggtc
ttcatgctctggggcagccatgcccagtccaagcgcctcttgatcccgcaggaccgcggt
cacctggtgctgatgagcaaccacccctcaccgctgtccgcattgcgtccgcctgtgccc
ttcatcggcaatgggcactttgggcaagccaagcggtttcgggaaacgcacggatattga
DBGET
integrated database retrieval system
