Comamonas terrigena: CT3_40000
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Entry
CT3_40000 CDS
T09012
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ctez
Comamonas terrigena
Pathway
ctez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CT3_40000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctez03400
]
CT3_40000
Enzymes [BR:
ctez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CT3_40000
DNA repair and recombination proteins [BR:
ctez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CT3_40000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBL26545
LinkDB
All DBs
Position
4481099..4481974
Genome browser
AA seq
291 aa
AA seq
DB search
MALNLDARQRAMLQDMGITFWGPSAPPAAVPAVAAAAPAEASALPAAVATPAAPTAVAAP
QPPTAASATATAPATATAAAPDPQPEHAAPAQPAADAASSATQAASTDAAPAHATPVYRA
PAAASAPWFMAPLVHAYAESAAPDAPDAGWLVLVECADPADPWAGDAGALLNNMLRALRL
QQHPQVRIAPLTRQAPGSAAGHPGLEPLAPALQTALATHRPARVLVLGLHAARAVLQRSE
ALGPLRAELHQLHGIPGVVSYDPAYLLRAPHAKPGAWADLCRAHALQPPAH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggccctgaaccttgacgcccgccagcgcgccatgttgcaagacatgggcatcaccttc
tggggccccagtgcgccgccggccgccgtgcctgcggtcgcagcagcagccccagccgaa
gcctctgccctcccggctgccgtagcgacgccagcggcccctacggcggtggcggctccg
cagccgcccaccgctgccagcgcaacggccacggcaccggcaactgcaacggccgctgcg
cccgacccacagcccgagcacgccgcaccggcccagcccgcagcggatgcagcctcctct
gcaacgcaggctgcatcaaccgacgcagcgcccgcccatgccacgccggtctaccgcgcc
ccggctgcggccagtgcaccctggttcatggccccgctggtgcatgcctatgccgaatcg
gccgcccccgatgcgcccgacgccggctggctggtgctggtcgaatgtgccgatccggcc
gacccctgggccggcgatgccggcgcactgctgaacaacatgctgcgcgcactgcgcctg
cagcagcacccccaggtgcgcattgcgcccctgacgcgccaggcgccgggcagcgccgcc
ggccaccccgggctggagccgctggccccggcgctgcagaccgccctggccacccaccgc
ccggcgcgcgtgctggtgctgggcctgcatgcggcccgcgccgtgctgcagcgcagcgaa
gccctgggcccgctgcgtgccgaactgcaccagctgcacggcatccccggcgtggtcagc
tacgaccccgcctacctgctgcgcgccccgcacgccaaacccggcgcctgggccgacctg
tgccgcgcccacgcgctgcaaccgcccgcgcactga
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