Chlamydia trachomatis D-LC: CTDLC_0608
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Entry
CTDLC_0608 CDS
T01901
Symbol
pcrA
Name
(GenBank) PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctf
Chlamydia trachomatis D-LC
Pathway
ctf03420
Nucleotide excision repair
ctf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTDLC_0608 (pcrA)
03430 Mismatch repair
CTDLC_0608 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctf03400
]
CTDLC_0608 (pcrA)
Enzymes [BR:
ctf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTDLC_0608 (pcrA)
DNA repair and recombination proteins [BR:
ctf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTDLC_0608 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CTDLC_0608 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADI52296
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All DBs
Position
687100..689004
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AA seq
634 aa
AA seq
DB search
MLTSELNAAQVTAVTAPLQPVLVLAGAGAGKTRVVTHRILYLIEESRLDPKQILAITFTN
KAANELKERVQSQCRELGYSDVPMVSTFHSLSVYILRRSIHLLDRQSNFVIYDQSDSEKL
IKQCLRKLNLDKKLCNAMQFTISQAKNRLQSPEDLDSKEYPDPTRTVYAEYQEQLRAANA
LDFDDLLFLTEKLLRTPEVQQEYANHWKALLIDEYQDTNHAQYLIAKRLAAAHNNIFVVG
DPDQSIYSWRGANISNILNFEQDYSQALVVRLEENYRSCGTILEAANALIQNNSARLEKT
LRSVKGPGDKIFCFTGKNDRDEAEQVLEEISNLHSYKDIPLSDICILYRTNFQSQSFEAA
LLKRGYPYEIIGGISFYKRREIQDILAFLRLFSNNYDMAAFERTISLKKCGIGATTLAAL
MNYAKTTDLPILQACWDVLEKKSIRLTKKQQQGLFSYLTHFHQMEQLYGNCDLHEFINET
IRITDYLSILKEDPETYEDRKNNLEQLLAETQTWGKSSENLPGFLEDLALKSSADETASS
HDRLKLMTIHNSKGLEFPVVFLVGLEENLLPHANSKGMHENIEEERRLCYVGITRAQEYL
YLSRAKTRFLWGTERTMVPSRFISELPRALLKFV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcttacatccgaattaaatgcagcacaagttactgccgtcacggcgccactacaacca
gtcctggtcttagctggagctggagcagggaaaactcgagtagtcactcatcgaatcctt
tatttaatagaagaatcccggctcgatcctaaacaaattttagctattacgttcacgaac
aaagcagctaacgaactaaaagaacgtgtccaatcgcaatgtcgtgagctaggatattca
gacgtacctatggtaagcacattccatagtcttagcgtttatatcctgcgacgctctatt
catttgttagatagacagtcgaattttgttatttatgatcagagtgattctgaaaaatta
attaagcaatgcttacgcaagctgaacctcgataaaaagctttgcaatgcaatgcaattt
actatctctcaagcaaaaaatcgcttgcagagtcctgaagatctcgattccaaagaatat
ccagaccctactcgcaccgtttatgctgaataccaagaacagttacgtgctgcgaacgct
ctagatttcgatgatctgttattcctaacagaaaaactgttgcgcacacctgaagtccag
caagaatacgctaatcattggaaagccttgttgatagatgagtatcaagacaccaaccac
gcgcaatatctcattgccaaacgtcttgctgcggctcataacaatatctttgtcgttgga
gatcccgaccaatctatatattcttggagaggcgccaacatctctaatatcttaaacttt
gagcaagattattcgcaggctttagttgttcgcttagaagaaaactatcgttcttgtggg
accatcctagaagccgctaatgctctgattcaaaataattctgcacgcttagaaaaaaca
ttgcgtagtgtaaaagggcctggagataaaattttctgttttacagggaaaaatgaccgc
gatgaggcagagcaagtcttagaggaaatctctaatcttcattcctataaagatatccct
ctctctgacatttgtattttatatcgaacgaactttcagtctcaatcgttcgaagcggct
cttcttaagcgaggttatccctatgaaattataggtggcatttccttctacaagcgtaga
gaaatccaagatattcttgctttccttcgcttattttctaataactacgacatggcagcc
tttgagcgaaccattagcctgaaaaaatgcggtattggagctaccacattagccgctctt
atgaactatgccaaaacaacagacctacctatattgcaggcttgttgggacgtattagag
aaaaaatctatccgtttaactaaaaaacaacagcaagggcttttctcttatttgactcat
ttccatcaaatggagcagctatacggaaactgcgatcttcatgaattcatcaatgaaacg
atccgcatcacggattacctctccatcctcaaagaagatcctgaaacctatgaagataga
aaaaacaacttagagcaattattagcagaaacgcaaacatggggtaaaagcagtgaaaac
ttgcctggtttcctagaagatctagctctaaaaagttccgcagatgaaacagcaagttcc
catgatcgcctcaagctcatgacgatccataacagtaaagggttagagtttcctgtagtc
tttctggtaggtcttgaagaaaaccttcttcctcatgccaactcgaaaggtatgcatgaa
aatattgaagaggaacggagattgtgttacgtgggaattacccgagcacaagagtatctc
tatttatctcgagcaaaaacccgattcctttggggaacggaacgcaccatggtccccagc
agatttattagcgagcttccgagggctcttttaaaatttgtttaa
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