Chlamydia trachomatis F/SWFPminus: SWFP_4401
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Entry
SWFP_4401 CDS
T03169
Symbol
pcnB
Name
(GenBank) polyA polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ctfw
Chlamydia trachomatis F/SWFPminus
Pathway
ctfw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctfw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SWFP_4401 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctfw03019
]
SWFP_4401 (pcnB)
Enzymes [BR:
ctfw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SWFP_4401 (pcnB)
Messenger RNA biogenesis [BR:
ctfw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SWFP_4401 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
Motif
Other DBs
NCBI-ProteinID:
CDG42417
LinkDB
All DBs
Position
468727..470004
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AA seq
425 aa
AA seq
DB search
MMACNQELLSPRGLDLLSKNSHSNLTPTIFYPSDHNIDLQSFSTHALSVVRTLKKAGYEA
YIVGGCIRDLLLKTEPKDFDISTSAKPEEVKTLFKNCILVGKRFRLAHIRFPNQIIEVAT
FRSGSNEEDSLITKDNLWGSAEEDVLRRDFTINGLFYDPSAEIIIDYTGGVEDLKNRYLR
TIGDPFLRFKQDPVRMLRLLKILSRYAFTVDPKTLEALQESRHELVKSSQPRVFEEIIKV
LSSGESTIFFQLASEHRVLEILFPYMAKAFSLSKTLQDQTFACLTALDTKIQKRSFCSER
HFLLAILLFPIVNFNVRYKYSQYPTMTIQSIFDYIRNFLTEFFADSFTSCSKKNFILTTL
LLQMQYRLTPLNAMKKEKKSFFNRRLLRHAYFREALYLLEIRSKVYPKVEATYGEWLKHY
ELASE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttgcaaccaagaacttctttcgcctagaggcttagatttgctcagcaaaaat
tctcattctaatcttactcctacgatattttatccatcagaccacaatattgatctgcaa
agtttctccactcacgcgctttccgttgtaagaactttgaaaaaagctgggtacgaagct
tacattgtcggaggctgtatccgagacctgttgttgaagacagaaccaaaagattttgat
atctcaacctctgctaaacctgaagaagtcaaaacgttattcaaaaattgtattcttgta
ggcaaacgatttcgtttggctcacatccgtttcccaaaccaaatcatagaggtcgctacc
tttagatctggtagcaacgaagaagactccttaattacaaaagataatctttggggatct
gccgaagaagacgtattacgcagagacttcacgattaacggccttttttatgaccctagc
gcagaaattatcatcgactacacaggcggtgttgaggatttaaaaaatcgctatctcaga
actattggagatcctttccttcgtttcaaacaagatcctgtgcgcatgctgcgcctatta
aaaattttatctcgttatgcttttacagtagatcctaaaactctagaagctcttcaagaa
tctcgtcacgaacttgtgaaaagctctcaacctcgagtctttgaagaaatcatcaaagtc
ttgagttctggggagtctaccatttttttccagctagcttccgaacatcgagtcctagag
attttattcccttacatggctaaggcatttagcttaagtaagactctgcaagatcagact
ttcgcttgcttaacagcattagacactaaaattcagaaacgctcgttctgttcagaaaga
cactttctgctggcgatcctattattccctattgttaacttcaatgtgcggtacaaatat
agtcaatacccaacgatgactatccaaagtatctttgactatattcgaaactttttgact
gaattttttgccgactcatttactagttgttccaagaaaaatttcatcttgacaactctg
ctattgcaaatgcagtaccggctgaccccattgaatgctatgaagaaagaaaaaaaatct
ttcttcaatagaagattgttacgccatgcctacttccgagaagctctttacttactagaa
atccgcagtaaagtgtatccaaaagtagaggctacctatggagagtggcttaaacattat
gaattagcatcggaatga
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