Chlamydia trachomatis F/SWFPminus: SWFP_6921
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Entry
SWFP_6921 CDS
T03169
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ctfw
Chlamydia trachomatis F/SWFPminus
Pathway
ctfw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SWFP_6921 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctfw03400
]
SWFP_6921 (recB)
Enzymes [BR:
ctfw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SWFP_6921 (recB)
DNA repair and recombination proteins [BR:
ctfw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SWFP_6921 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_16
PDDEXK_1
AAA_11
DUF7660
Motif
Other DBs
NCBI-ProteinID:
CDG42651
LinkDB
All DBs
Position
complement(728597..731677)
Genome browser
AA seq
1026 aa
AA seq
DB search
MSSFDIFSPTASVSGKFFLEASAGTGKTFTIEQVVLRSLLEGPIEQTKNILVVTFTNAAT
NELKLRIQASLKQALSLFSQALSHPGTPLPPYISSSETKVKQLYMKIRNSLATLDEMNIF
TIHGFCRFTLEQHFPWIQPIQPSSIFSEPQTIQQYILDYLRKNLWDTVLSPKQYAFLSYH
HRATTQQTRHLIERLLQDYTSTPNLALSPLSITLQKLKAWVSRYQHLAPLPLEEMQAFSL
RFKQSDLSIERELPAFVQQFETNPYSLDMLFFPGMVQKFQEENRNKKKLSAPASPLDPFF
QDWIQLAHPFCQKEPIFHTLLKSVQQHLKTHCAQSYSHDESIATLESLLDHNDTVVSQLR
KQFQLVLIDEFQDTDKRQWQIFSKLFASPDYSGSLFLIGDPKQSIYEWRNADLPTYLQAK
HSFPKEAQLILDTNYRSTPELMQALNHLFSLPTPFLETPQNILYHPLHSKGSTEISYSEF
SPIHFFSSKDIQEETLWISKTASYLRSAYSIPFGNMAVLVQDYPQALKLITHSTIPMAYC
KEKRIFDRTESPYLLILLLEALLYPENQQKIQAILMSRLFQLSSTEIHQHLKTFSSLFFT
LNRHLYHYSLLATFYKLIGENVLSQTIGETLLQTPLGDIIFQELEALCLYLDKTTENPHQ
KLLHLINILITGKYDEELSFSSQSNDENMIKITTVHSSKGLEYDVVFCSCLNKAKEKTPS
VHMREMYVACTRAKKFLFIPFSPIEKRSLSTKKLSALANYANVTKHHSVPHLVETLTSSS
PELFSSSFQPPESSLTPDRERLPQQTYFSLPHLPSRTIHSFSSTVENLHFSEPIQELSPS
LLFPGGSLTGTLIHKLLESLAGNFAAYFEEIFNKAQTLLKNTPLEGYESIIAEKIFTVFS
TTLPFSSGSFALRNVHPHNIRAEETFLLQEEGELWQGIVDLFFEHKGRFFIIDWKTSFLG
DETSCYSPDQLHLYIQRQGLDRQERLYRKAAKRFLHQFNSSLQVEMAFVFIRGLDDKGNG
FLQPGR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttttgatattttttcaccaacagcttctgtttctgggaaatttttcttagaa
gcttctgcaggaactgggaaaacattcactatagaacaagtggttcttcgctcgttatta
gaaggaccgatcgaacagacaaagaacattctggtagttacattcaccaacgcagctacc
aatgaattaaaactgcgtattcaagcaagcctcaaacaagcattgagtcttttctcccaa
gcactctctcatcccgggactcccttacctccctatatctcttcctcagaaacaaaagta
aaacagctttacatgaagatccgtaatagcctggccactctagatgaaatgaacatcttt
actattcatggattttgtcgttttacactggagcaacacttcccttggatacagcctatt
cagccgtcttccattttctcagagcctcaaaccatacaacagtatatcctagactactta
cgtaaaaatctttgggacacggttctctctcccaaacaatacgccttcttatcttatcat
caccgcgctactacccaacaaacacgccacctaatagagagactacttcaagattacact
tccacaccaaatttagcgctctcgcctctatcgataaccctgcaaaaactaaaagcttgg
gtctcccgctaccaacacttagctcctctccctctcgaggaaatgcaagctttctctctt
cgttttaaacaaagcgatctctctatcgagcgggaactccccgcttttgtgcaacaattc
gaaaccaatccttattctttggatatgctgtttttcccaggaatggtacagaagtttcag
gaggaaaaccgcaataagaaaaaattaagtgctccagcttctcctttagatccttttttc
caagattggatacagttagctcatcctttttgccaaaaagaacctattttccatacgcta
cttaaaagcgtgcaacaacatctgaaaactcactgcgcacaatcctattcccatgatgaa
agcatagccactttagaatctcttctagatcacaacgatactgtcgtctcacaactacgt
aaacaatttcagctagtcttgatcgatgaattccaagacactgacaaacgtcagtggcag
atcttttctaaactctttgcttctccagactattcgggatccctttttcttatcggagac
cctaaacagtctatttatgaatggagaaatgcagacctccccacatacttgcaagcaaaa
cactccttcccaaaagaagctcagcttattttagatacaaattaccgatccaccccagag
cttatgcaagctctcaaccatttgttttctcttcccacaccgtttctagagactccacaa
aacattctgtatcaccctttacattctaaagggagcacggagatctcctactcagagttc
agtcctattcatttcttctcctcaaaagacattcaagaagaaacgttatggatttctaaa
accgcttcttatcttcgatcagcgtattccattccatttggaaatatggctgttctagta
caagattatccacaggctctgaagctaatcactcacagcaccatccccatggcctactgc
aaagaaaaacgtatttttgatcgcacagaatccccctaccttctgattctactattggaa
gcccttctgtacccagagaatcaacaaaagattcaagccattttgatgagccggctattt
cagctttcctctacggagattcaccagcatcttaaaacgttttcttctttgtttttcact
ctgaatcgacatctctaccactattctctattagctaccttctataagctgataggagaa
aacgttttatctcaaaccataggagaaacattattgcaaacccctcttggagatatcatt
ttccaagaattagaagcgctatgcttgtatcttgataaaactacagagaatccccatcaa
aaactcttacatctcatcaatattctgattacagggaagtatgatgaagagctttctttc
tcgtcgcaatctaatgacgagaatatgataaaaattacgaccgttcactcttcaaaaggg
ctcgaatacgatgtagtattttgctcttgccttaacaaagcaaaagagaaaactccttct
gttcatatgcgagaaatgtatgtcgcatgcacaagagctaaaaaattcttatttattccg
ttttctcctatagagaaacgctcactaagcacaaaaaaactttctgctcttgctaactat
gctaatgttacaaaacatcatagcgttcctcatttagtagaaaccttgacttcctcatct
ccggaactattttcatccagcttccaacctcctgaaagctctctaactccggatagagaa
cgtcttcctcaacaaacatacttttctcttccacatctcccttctcgaactattcactct
ttctcttctacggtagagaatcttcacttttcggaacctattcaagaactgtcaccctct
cttttatttcctggaggctctctaacaggaacgttgattcataaacttttagaatcatta
gcagggaattttgctgcttattttgaagaaattttcaataaagctcagacattattgaaa
aacactcctttagaaggatacgagtctattattgcagaaaaaatctttacggtcttttca
acgactcttcctttttcttccggatcctttgctctcaggaatgtacatcctcataacata
cgtgcagaggaaactttcttactacaagaagaaggagagctgtggcaaggaatcgtcgac
ttgttttttgaacataagggtcgattttttatcatcgactggaaaacttctttcttagga
gatgaaacctcttgctattccccagatcaactccatctctatattcaacgtcaagggtta
gatagacaggagagattgtacagaaaagcagcgaaaaggttcctacaccaatttaattca
tcattgcaagtagaaatggccttcgtatttatccgaggcttggatgacaagggcaatgga
tttttgcaaccaggacgttaa
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