Chlamydia trachomatis E/11023: E11023_02065
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Entry
E11023_02065 CDS
T01902
Name
(GenBank) exoribonuclease II
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
ctg
Chlamydia trachomatis E/11023
Pathway
ctg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E11023_02065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctg03019
]
E11023_02065
03016 Transfer RNA biogenesis [BR:
ctg03016
]
E11023_02065
Enzymes [BR:
ctg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E11023_02065
Messenger RNA biogenesis [BR:
ctg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E11023_02065
Transfer RNA biogenesis [BR:
ctg03016
]
Prokaryotic type
tRNA degradation factors
E11023_02065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
Motif
Other DBs
NCBI-ProteinID:
ADH20864
LinkDB
All DBs
Position
454424..456508
Genome browser
AA seq
694 aa
AA seq
DB search
MGKAKNKKKFLKNRKQVLVPGTLFIHSRKGFGFVSPDQPELYPFDIFISASDLKGALDGD
HVLVALPFSLRGGEKRKGVIHKVLSRGKTVLVGTIVSLINPTLAMVCVNTIGPEHPLKAE
LLPKRTYKLGDRLLLKTPVWKENYPSKEPPPLAMLEFIGNISNAKTDFPVIKAEFSITEE
FPDAVVQEASQFLQKHVTQALHSRKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILG
VHIADVSHYVTPNSALDREAAKRCNSIYFPGKVIPMLPSALSDNLCSLKPNVDRLAVSVF
MTFSKEGFLSDYRILRSVIRSKYRMTYDEVDEIIEKKQTHPISRTILKMAELSRIFSDIR
EQRGCTRLVLPSFTMSLDNLQEPVALIENKQTAAHKLIEEFMLKANEVIAYHISHQGITM
PFRTHEPPNEESLLVFQETAKAMGFTITQTPAQEPDYQYLLQETTAGHPLEPILHSQFVR
SMKTASYSTENKGHYGLCLDYYTHFTSPIRRYVDLIVHRLLFHPLSVEEEHLEQIVRACS
SQERIAAKAEGAFVNIKKARFLKKFIEEQPATLYKAFIITASPEGISFVLPEFCHEGFIP
AAKLPQAYVLQTKIGLEELPEHLRPGAVISVQLASVTLLTQSIEWTLVEATTKAKAKRTS
KKKKTESVTTKEKKKSSAKKKKGATKTKKGSGKN
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgggaaaagctaaaaacaaaaagaaatttctaaaaaatagaaagcaggttttggttcct
ggtaccttattcatccattctagaaagggctttggatttgtatccccagatcaaccggag
ttatatccttttgatattttcatctcagctagcgacttaaaaggtgctttggatggagat
catgttctcgtggctctccccttttctcttcgtggaggagaaaaaagaaaaggggtcatt
cataaagttctttctcgggggaaaacagtcttagtagggactattgtctctcttatcaat
ccaactctagctatggtttgtgtgaataccataggccctgaacatcctttaaaagccgag
ctcttacctaaaaggacttacaaactaggagatcggttgttactaaaaactcctgtgtgg
aaggagaattatcccagtaaagaaccacctcccttggctatgctggaatttataggcaat
atctctaatgctaagacagattttcctgttattaaagccgaattctctattacagaagag
ttccccgatgcagtggtacaggaagctagtcagttcttacaaaagcacgtaacacaagcg
ttacactcgaggaaagatctccgagatttgttatgtttcaccatagactcttcctctgct
aaggactttgacgacgcagtctcactaacttatgatcatgagggaaactatattctaggt
gttcatattgcggacgtctcccactacgtgactccaaattccgctttggatagagaagct
gctaaacggtgcaactcgatctacttccctgggaaagtcatccctatgctgccttcagcc
ctttctgacaatctgtgcagcttaaaacctaatgtggatcgcttagctgtatctgtattt
atgactttctctaaagagggattcctttctgactaccgaattttgcgtagcgtcattcgt
agtaaataccgtatgacatatgatgaggtagatgaaattatcgagaaaaaacagactcac
cctatttctagaaccattttaaagatggctgaattgagccgtattttttctgacatccga
gaacaacgtggatgcacgcgtctcgttcttccttcgttcacgatgtctcttgataattta
caagagcctgtagcccttatcgaaaacaaacaaacagctgctcataaactcattgaagag
tttatgctgaaagcgaatgaagtgatagcctatcacatttcccatcagggaataaccatg
ccattccgcacacatgaacctcctaatgaagaaagtctccttgtgtttcaagagacagca
aaggctatgggcttcaccattacacaaaccccggcgcaagaaccagattaccaatattta
ttgcaggaaacgactgcaggccatcctttggagccaatccttcattctcagtttgtacgc
agtatgaagacggcttcctattctacggaaaacaaaggccattacggtctgtgcttagac
tactacacacactttactagcccgatccgccgatacgtggatttgatcgttcaccgactg
cttttccatcctctctctgtagaagaagagcatcttgaacaaattgttcgagcctgctca
tcccaagaacgcattgcagcgaaagctgagggagcttttgtaaatattaagaaggctcgc
ttcttgaaaaaattcatagaagagcagcctgcaactctttataaagctttcattattaca
gcatccccggaagggatctcttttgtcctcccagaattttgtcatgaaggtttcattcct
gcggctaaactacctcaagcgtacgtccttcaaacaaaaataggattagaagaacttcct
gagcatttgcgtcctggagctgttatttctgtgcaactggcttctgtcaccttgctcaca
cagtctatcgagtggacgttggttgaagccacaactaaagctaaagcaaagcgtacttct
aaaaagaaaaaaacagaatctgtcacgactaaagaaaagaaaaagagttctgctaaaaag
aaaaaaggagctaccaaaacgaagaagggcagtgggaaaaattag
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