Acetivibrio thermocellus ATCC 27405: Cthe_0004
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Entry
Cthe_0004 CDS
T00474
Name
(GenBank) YD repeat-containing protein
Organism
cth
Acetivibrio thermocellus ATCC 27405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
WXG100
DUF5640
Sugar-bind
Motif
Other DBs
NCBI-ProteinID:
ABN51246
UniProt:
A3DBB7
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Position
3874..9702
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AA seq
1942 aa
AA seq
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MQIKITPEEMTRIASNIKEVSKKFEDITREVKNIVNYIDWELRSKEGIEQKLLIADTAAK
NIAQDLDRMSRDLISARDKMMEAEDKAAIAARKKRNINFENLIHDALEVLFRPPVGAIFR
LFNYLPWDRLVGSGTANCPNTFAGDPVNVVSGNFYLTRRDITIPSRGMALEITRYYNSMD
NTPGMFGKGWKTDYETCLKKKEDSEDIIVMYPGGSIRIFEHTGSGTFKSPKGVYDTLFKT
EDEMYILKVQKGITYKYDQAGSLVSISDSNNNEIRFKYNREGLLSAIMSPRGKLLMFSYE
SDRVGSVTDHTGRKLRYKYDEKGNLIQVIYPDGGKITYAYDNIGLISITDQNGNTYVQNT
YDEKGRVVKQLDHENNELIIEYDEENRENTFKWTKSGITRVYKYNEKMLLTEIRYDDGSV
QKYTYDENFNRNSETDRNGNTTYRKYDDKGNLIEVISPEPFCYKTKYSYDEEGRLIKVVS
PGGGEVSFEYDERGNLLKRIVKTGSRSYSEWAYTYDQYGRMTTSKDAENNTKTFEYGEED
VNKPTLIKDAVGNIFKYEFDKVGRVVATTTHYGTVRLKYDECDRITHITDTEGNTTRICY
DKAGNMTKVIAPKQYGEKGENGSGYAFEYNAMDKLIRTIDPLGNVFAVKYDENGNKIKEI
NPNYYSSEKDDGIGIEYKYDTNHRRISTIFPDGSMSRIKYDAEGNIIKTISWKDYNKDLD
DGPGMEYTYDEMNRLTQIIDPKGNVIKKYIYDEDGRIVKEIDAKGYSSADNDEERWGTIY
KYNLAGWLVEKRTPLQQKNGEIYYNIIEYVYDRNGRVVQEKRSPEYVTRTGYPKKWNIIN
YKYDPNGNLIEVTDSLGAVITYEYDCFGKRTLERMKINDRKQRVTRYEYNGVGKLTRVIR
ELDGEDLSGYSEDKVLAETIYNYDPNGNLIEVISPEGYLTVFKYDDANRRIKSILYQPQN
GVKLSGSAYCALLNTKSRSISYEYDRAGNLVREILPNGGVIINEYDEMNRRIRVTDPDGN
TRRIFYDNSGNVVKYVNPENYDPEKDDGTGTTYLYDSMNRLIEIVNAAGIVVERNIYNTA
GEIIKRIDSVGYSSADNDNDRHGVEFSYDLAGRLEEITTPEAKIHGRKSQKYTYDAEGNI
TGVVDGNGNSTRYSLDLWGKIINITEPDGTNIKYDYDYAGNLVSTTDGNGNTTRYTYNSF
NLLSEIIDPDGRKITFKYDRQGRMVQRIGKDGRSTYYNYNADNNITGRWEEEGQMEKYEY
NVDGSLAASISGTTIHTYAYTLAGRLKSKTTNGQKVLEYDYNKNGLVSKVTDISGTPVEY
TYDVLGRLTTVTNGGKVSARYEYNIDNTIAQVLYGSGVCARYEYDMDKKIKELLNIDPTG
KEMFVYRYAYDGNGNPILKEENEKVTAYSYDTLNRLKEVVYPRNIRERFEYDANGNRIKR
ECGDILEQYEYDSCNRLVQRIKNGLLTEYEYDARGNLIKEKEGELTKLYSYDGFDRLIRV
QNPDGTYMENIYDAENLRTVSIENGRYNRYVYNGRNIACEVDEDWSLKDRIVFGHTILQR
EDSDKNEYYYIHNAHGDITALTDGKGEVINSYSYDAFGNILDSVEKIENRFKYSGEVLDP
VTGQYYLRARYYNPSIGRFMQEDTFRGDGLNLYTYVANNPLKYVDPTGHCKESVDFSDVY
DNILSENPNDILKDMVLRKIMGPDWTPNYLRNSNEIEDYKFKAVIYLNRSDGAFLQGHSA
IMLVTDDNQGLFYSFVGDASKTLQLIAGFNSPGKILKPFDKRKKQYVTVDVISFLEKGRI
ENVEKFKGNDTFTDQYDRYIYIPITNEQGQAMYRKAEMLYKQPPEYNLYANNCNHVAQQI
LEAGGLNFAPTKGNALDERINLYTSFNPLVHLPPRAMLNYIFDRVDKTIPNAAYNYGAFI
ANKQGWIAGNTDDSAFFWNPFK
NT seq
5829 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaaaataactcctgaagaaatgacaagaatagcaagtaatataaaagaagtg
tcaaagaaatttgaagatataactcgtgaggtaaaaaatatagtaaattacattgattgg
gaacttagaagtaaagagggaatagaacaaaaactattaatagcagatacagcagcaaaa
aatatagcccaggacttagacagaatgtcacgggatcttataagtgcaagggacaaaatg
atggaagcagaagacaaggctgcaattgcagcaagaaaaaagagaaatataaacttcgaa
aatttaattcatgatgctcttgaggtactttttaggccaccagtcggagcaatattcagg
ttatttaactatttgccgtgggatagactggtaggctccggaaccgcaaattgtcccaac
acttttgcgggggaccctgtaaacgtggtatcgggaaatttttatttaacaagaagagat
ataaccataccttcaagaggtatggcgcttgagataaccagatattacaactccatggat
aatacgccaggtatgttcggtaaaggatggaaaacagattatgaaacatgcctgaagaaa
aaggaagacagtgaggacataatagtgatgtatccgggagggagcataaggatattcgaa
catacggggtcaggaactttcaaatctcccaaaggtgtgtacgatacactttttaaaaca
gaggatgaaatgtacatattgaaggttcaaaaggggattacctacaaatatgaccaggct
ggaagccttgtatcaatctcggattcaaacaataacgagataagatttaaatataaccgg
gagggattgctgtctgccataatgtcaccgaggggaaaacttttgatgttttcctatgaa
agcgacagggttggcagcgtaactgaccacacgggaaggaagctgagatataaatacgat
gaaaaaggaaatctgatacaggtaatataccctgacggaggaaaaattacctatgcgtac
gataacatagggctaatttcaataaccgaccagaatggcaacacctatgttcaaaataca
tatgatgaaaaaggcagagtagtaaaacagcttgaccatgagaataatgagttgattata
gaatatgacgaagaaaatcgtgaaaatactttcaaatggacgaaaagcggtataacccgt
gtgtataagtacaatgagaagatgcttctgaccgaaataaggtatgatgacggaagtgtg
caaaaatatacctatgatgagaatttcaacagaaacagtgagacggacagaaatggcaac
acgacgtacaggaaatatgatgacaagggcaatttaatagaagtaatttcaccggagcct
ttctgctataagacaaaatacagctatgacgaggaaggcagactgataaaggtagtgtca
ccgggcgggggagaagtgtcttttgaatatgacgaaaggggaaaccttttaaaacgcatt
gtaaagaccggaagcagaagttattcggagtgggcatatacgtatgatcaatatggaaga
atgacaacatcaaaagatgcggaaaacaacacgaagacctttgagtatggagaagaagat
gtaaacaaaccgacattgataaaagatgcggtagggaacatatttaaatatgaatttgac
aaagtgggtcgggtagtggccacaaccacacattacggaacagtaaggttaaaatatgat
gagtgtgaccggataacccacataaccgatacagaagggaacacaacaagaatctgctat
gacaaggcaggaaacatgacaaaggttatagcgccgaagcagtatggggagaaaggcgaa
aacgggtcaggatatgcatttgaatataatgcaatggacaagcttataaggacaattgac
ccgttgggcaatgtttttgcggtaaaatatgatgagaacggcaacaagataaaagagatc
aacccgaactactatagttctgagaaagatgacggtataggaatagaatacaaatatgac
accaaccaccgcaggataagcacgatattcccggacggaagcatgtcgaggataaagtat
gacgcggaaggcaatataataaagacgatatcctggaaggattataacaaggatttggat
gacgggccggggatggagtatacctatgatgaaatgaacaggcttacgcaaataatagac
ccgaaagggaatgtaataaagaaatacatatacgatgaagacggaagaatcgtgaaagaa
atagatgcaaaaggatatagcagtgcagataacgatgaagaacgttggggtacaatatat
aaatacaaccttgccggatggcttgttgagaagaggacaccgttacagcagaaaaatggt
gaaatatattacaacataatagaatatgtgtatgacagaaacggaagggtagtacaggag
aaaagatctccggaatatgtgaccaggacaggatatccaaagaaatggaacataataaac
tataaatatgatcccaacggaaatctgatagaggtaaccgacagccttggagcagtgata
acctatgaatatgactgctttggcaagagaacactggagagaatgaaaataaacgacagg
aagcaaagagtaaccagatatgaatataatggagtgggaaaattaacgagagtaatacgt
gaattggacggagaagacctttcaggatacagtgaagataaggttttggcggagacaata
tacaattacgacccaaacggcaatcttatagaggtgatttctcctgaagggtatttgact
gtatttaaatacgatgatgcaaaccgtaggataaagagtatattgtatcaaccgcagaac
ggtgtgaaactgagcggcagtgcgtattgtgcccttttaaatacaaagtcgaggagcata
agttatgagtatgaccgggcagggaaccttgtaagagagatattgccgaacggtggcgtc
ataataaacgaatatgatgaaatgaacagaagaataagagttaccgaccctgacggaaac
accagaaggattttctatgacaattcagggaacgtcgtaaaatatgttaatccggagaat
tacgatccggagaaagatgacggaacaggtaccacatacctttatgactcaatgaaccgt
cttatagaaatagtaaatgcagcgggtatagtagtggaaaggaatatatacaacacagcg
ggagagataatcaagaggatagactcagttggttatagttccgcagataatgacaatgac
aggcatggagttgaatttagttatgacctggcgggacgtttggaggagataacaacgccg
gaagcgaagattcatggccgaaagagtcagaaatacacatatgacgcagaaggaaacata
acaggagtagttgacggaaacggaaacagcacaaggtacagtttggacttatggggtaag
ataataaacataacggaacctgacggaaccaatataaaatacgattatgactatgcggga
aatcttgtatccactactgacggtaacggaaacactacccgttatacatacaacagcttt
aaccttctgtcggagataatagatcctgacggaaggaaaataaccttcaagtatgacaga
cagggaagaatggtgcaaaggatagggaaagacggacgcagcacatattataattacaat
gcggataacaatataaccgggcgttgggaagaagaagggcagatggaaaaatacgagtat
aatgtagacggaagcctggctgcgtcaataagcggtactactatacatacttatgcctat
accttggcaggaaggctgaaaagtaagacaaccaatggacagaaggtattggagtatgat
tacaataagaatgggcttgtatcgaaagttaccgatataagtggaacaccggtggagtat
acatatgacgtactggggagattaacaacggtaacaaacggaggcaaagtttctgcgagg
tatgaatacaatattgacaacacaatagcgcaggtgttgtatgggagtggagtatgcgct
agatatgaatacgacatggataagaagataaaagagcttttaaacatagacccgacaggg
aaagaaatgtttgtatacaggtatgcgtatgatgggaacggcaatccaattttgaaagaa
gagaacgaaaaagtaacggcttacagttatgatacgctgaaccgtttgaaagaagtagta
taccctaggaatataagagagaggtttgaatatgatgcgaacggcaacaggatcaaaaga
gaatgtggagatatactggaacagtatgaatatgacagttgcaatagattggttcaaaga
ataaagaacgggctgttaacggaatatgagtatgatgcgaggggaaatttgataaaagaa
aaagagggtgagttgactaaattatacagctatgacggatttgacagactgatacgtgta
caaaatccggacggaacatatatggaaaatatatacgatgccgagaatttgagaacggtc
tcgatagaaaacggtaggtacaacaggtatgtgtacaacggaagaaatatagcgtgtgaa
gtagacgaggattggagtctaaaagacagaatagtctttgggcatacgatattacaaaga
gaagacagtgacaagaatgagtattattatattcacaatgcccatggggatattacagct
cttaccgatgggaaaggagaagtaataaacagctacagttacgatgcttttggaaatata
ttggacagtgttgagaagatagagaacagattcaagtattcgggagaagtgcttgatcct
gtgacgggacagtactacctgagagcgagatattataacccaagcataggaaggtttatg
caggaagatacgtttaggggtgacggactaaacttatatacctatgttgccaacaatcca
ctaaagtacgttgacccaaccggtcattgtaaagagagtgttgattttagtgatgtatat
gacaacattttaagtgaaaatcctaatgacattttgaaagatatggtattaagaaaaata
atgggaccggactggactccaaactatttgagaaattcaaatgaaatagaggattataag
tttaaggcagtaatatatctaaatagaagtgacggtgcttttttgcagggacattcagcg
ataatgcttgtaaccgatgataaccaagggttgttctatagctttgtgggtgatgcaagt
aaaacacttcagcttatagcaggatttaattcgccggggaaaatattaaaaccatttgat
aaacgaaaaaaacaatatgttacagtcgacgttattagttttttagaaaaaggaagaatt
gaaaatgtggaaaagtttaaagggaatgacacatttactgatcaatatgatagatatatt
tatatacctataacaaatgagcaggggcaggctatgtacaggaaagcggagatgttatat
aaacagcctccggagtataatctctatgcaaataattgtaatcatgtagcacaacaaata
ttggaagcaggaggtttgaattttgcaccgacaaaagggaatgcattagatgaacgtata
aatttatatacatcttttaatcctcttgttcatttaccgccaagagcaatgctgaattat
atttttgacagggtagacaagacgatacctaatgctgcatataattacggcgcttttatt
gcgaacaagcaaggttggattgcgggaaatacggatgatagtgcatttttttggaatccg
tttaagtaa
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