Acetivibrio thermocellus ATCC 27405: Cthe_0009
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Entry
Cthe_0009 CDS
T00474
Name
(GenBank) YD repeat-containing protein
Organism
cth
Acetivibrio thermocellus ATCC 27405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
WXG100
DUF1576
Motif
Other DBs
NCBI-ProteinID:
ABN51251
UniProt:
A3DBC2
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Position
12555..18077
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AA seq
1840 aa
AA seq
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MQIKITPEEMTRIAGNIREVSDKFNDIALEVKRIINSIDWELRSRKGINEKSSIAQATAI
KISDRLNKMSQSLIRARDKMIEADNKASATAKKMKTVSFKRTVAAATLSNYPSDVEYVDP
LWNHVVGPGTANCPNTYVGDPINVASGNFYLTRRDIAIPSRGMGLEITRYYNSMDNTQGI
FGKGWRIDYETCLKKKEDSEDIIVVYPEGNIRVFEYTDTGDFKSSKGVYDTLFKAEDGTY
ILKVQKGITYKYDQAGSLISISDSNNNEIQLKYNREGLLSTVISTRRKLLMFSYEGYRVS
SITDHTGRKLKYKYDEKGNLTQVIYPDGGKITYAYDDVGLISVTDQNGNTYVQNTYDKNG
RVIKQLDHQENELIIEYDDENRENTFKWLKSGITRVYKYNTDMLVTEVRYDDGSVQKYTY
DENLNRNSETDRNGNTTCKKYDDKGNLIEVTSPEPFCYKTKYSYDENGRLIKTVSPGGGE
VTFEYDDRGNLLKRTLKNGSRSYSEWSYTYDQYGRITSSRDAENNITSFEYGEEDVNKPT
LIKDAVGNTFRYEFDKVGRVTAITTGYGTVRLRYDDCDRITHITDAEGNIIRLNYDKAGN
MTKIIAPKQYAEKGENGAGYTFEYDAMDKLIKTIDPLGNVFAVKYDENGNKIKEINPNYY
NSQKDDGIGIEYKYDTNHRRISTIFPDGSMSRTKYDPQGNIIKTISWKDYDKDLDDGPGM
EYTYDEMNRLTQIIDPEGNVIKKYIYDEEGRIVKEIDAKGYSSADNDEERWGTIYKYNLA
GWLVEKRTPLRQKDGKIYYNIIEYVHDKNGRVVKEKRSPEYVTKSEYPKKWNVINYKYDP
NGNLIEVTDGLGASITYEYDSLGKKTLEKMKINDKKQKVTRYVYNSVGRLVKVIQELDGE
DLSGYSNEKVLAETIYNYDPNGNLIEVISPEGYLTVFKYDDANRRIKSILYQPQNGVKLI
GSAYCALLNTKARSISYEYDRAGNLVKQILPNGGVIINEYDEMNRKIKVTDPDGNTTRIF
YDNTGNIVKYVEPGNYNPEKDDGVGTTYLYDSMNRLIQIVNAAGIVVEKNIYNTAGEIIK
KIDSVGYKSADNDNDRHGVEFSYDLAGRLVEITTPEAKIHGRKSQQYTYDAEGNITGIVD
GNGNSTRYSLDLWGKIINITEPDGTNIKYDYDYAGNLVSTTDGNRNTTRYTYNSLNLLSE
IIDPDGRKIIFKYDRQGRMVQRIGKDGHSTYYTYNADNNITGCWEEEGQMERYEYNIDGS
LAASISGTTIHTYTYTLAGRLKSKTTNGRKVLEYDYNKNGFVSRLVDISGTPVEYTYDVL
GRVAAITNGGKISAKYEYNIDNTIAQVLYGSGICARYEYDLDKNITRLLNTDPTGKEMFV
YKYAYDGNGNPILKEENGKVTAYGYDALNRLQEVIYPGNVKERFTYDANGNRLKREFRDI
LEQYEYDNCNRLIQRIKNGLVTEYEYDEKGNLIKEKEGELTKLYSYDGFDRLIRVQNPDG
TYMENIYDAEDLRTISIENGRYNRYIYSGRNIACEVDEDWRLKDRIVRGHTILQKEDGNK
NAYYYIHNSHGDITALTDDKGKIANAYSYDAFGNILDSVERVDNRFKYSGEVYDSVAGQY
YLRARYYNPSIGRFIQEDPFRGDGLNLYAYVANNPVRYIDPTGNCKEGVNFNNNLEETTK
VIVEKNESKGNSVWDIVKDIFVDTIEGAVDEIIAKKVIERLPNYSAKTLMGHAKFGYAFE
ATKVKPIPGVKGLKSFSKVAGPVAVMVYGYEVYQDIKKYDGWDAVKAITVTTVATAVTFL
AGFILAQAALPVVATLIVSAAVGIAIGFFADWVKKKWIGY
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataaaaataacacctgaagaaatgacaaggatagcgggaaatataagagaagtt
tcagataagtttaatgatatagcactggaagtaaaaaggataataaattctattgattgg
gagcttagaagcaggaagggaataaacgaaaaatcgtcaatagcgcaagcaacggcaata
aaaatatccgatagactgaataaaatgtcacagagccttataagggcaagagacaagatg
atagaggctgacaataaggcttcagccacagccaaaaagatgaagactgtaagctttaaa
aggacggttgctgcagcaacgttgtcaaattatccgtcagatgtagaatatgttgatccg
ttgtggaaccatgttgtaggtcccggaactgcaaactgccctaatacatatgttggagac
cctataaatgtggcatcgggaaatttctatttaacaaggagagatatagctataccttca
agggggatggggcttgaaataaccagatattataattcgatggataatacgcaaggtata
ttcggtaaaggttggaggatagattatgaaacgtgccttaagaagaaggaagacagtgaa
gacataatagtagtatacccggaaggaaatataagagtatttgagtataccgatacagga
gatttcaaatcttccaagggtgtgtacgacacgctttttaaggcggaagacggtacatac
atattaaaagttcaaaaaggaattacatacaaatatgaccaggcaggaagccttatatca
atttccgattcaaataacaacgagatacaactcaaatacaatcgcgagggattgctgtct
acggtaatatcaacacgcagaaaacttttgatgttttcttatgaaggctacagggttagc
agcataactgatcatacgggaaggaagctgaaatataaatacgatgaaaaagggaatctg
acacaggtaatataccctgacggagggaaaattacctatgcctacgatgacgtagggtta
atttcagtaaccgaccaaaacggcaatacctatgtccaaaacacctatgataaaaacgga
agggtaataaagcagcttgaccatcaggagaatgaattgattatagaatatgacgatgag
aatcgtgaaaacaccttcaaatggttaaagagcggtataacccgtgtatacaaatacaac
acggacatgcttgttactgaagtaagatatgatgatggaagtgtgcagaaatacacctat
gatgaaaatcttaacagaaacagcgagaccgacagaaacggtaacacaacatgcaaaaaa
tatgatgataagggcaatttaatagaagtaacctcaccggaacctttctgctacaaaaca
aagtacagctatgacgagaatggcagactgataaaaacagtgtcaccgggcggcggagaa
gtaacatttgaatatgatgataggggcaatcttttaaaacgtaccttaaaaaacggaagc
agaagttattcggagtggtcgtatacctatgaccaatacggtaggataacaagttcaaga
gatgctgagaacaatataacaagctttgagtatggagaagaagacgtaaacaagccaaca
ttaataaaagatgcggtggggaatacattcagatatgaatttgacaaagttggacgagtg
acagcaataacgacaggttatggcacagtgaggttaagatatgatgactgcgaccggata
acccacataaccgatgcggaaggaaatattataagacttaattatgataaagcaggaaat
atgacaaagattatagcgccgaagcagtatgctgaaaaaggcgaaaacggggcaggatat
acttttgaatatgatgcaatggataagctgataaagactattgacccattgggtaatgtc
tttgcggtaaaatatgatgaaaacggtaacaagataaaagaaatcaacccgaactactat
aattctcagaaagatgacggtataggaatagaatacaaatacgacaccaaccaccgcagg
ataagcacaatattcccggacggaagcatgtcaagaacgaaatatgaccctcagggcaat
ataataaagactatatcatggaaggactatgacaaggatttggatgacggaccgggaatg
gagtatacttatgatgaaatgaacagacttacgcaaataatagaccctgaaggaaatgta
ataaagaaatacatatatgacgaagagggaaggatcgtaaaggaaatagatgcaaaaggc
tacagcagtgcagataatgacgaagaacgttggggaacaatatataaatacaaccttgcc
ggctggcttgttgaaaagaggacaccgctacggcagaaagacggcaaaatatactataac
ataatagaatatgttcatgataaaaacggaagagtagtgaaggagaaaagatctccggaa
tatgtgaccaaatcggaatatccgaagaaatggaacgtaataaactacaaatatgatccg
aacgggaatttaatagaggtaacagacggccttggagcctctataacctatgagtatgac
agccttggaaaaaagactttggaaaagatgaaaataaacgataaaaaacaaaaagtaacg
cgatatgtgtataacagtgtgggaagactggtaaaagtaatacaagagctggatggagaa
gacctttcaggctacagtaatgagaaggttttagcagagacaatatacaattacgatcca
aacggcaatcttatagaagtaatctctccggaaggatatcttacagtatttaaatacgat
gatgcaaaccgtaggataaagagtatattgtatcaaccgcaaaacggtgtgaaactgatc
ggcagtgcgtattgtgcccttttaaatacaaaggcgaggagcataagctatgagtatgac
cgggcagggaaccttgtaaaacagatattgcctaacggtggcgtcataataaacgaatat
gacgagatgaacagaaagataaaagttactgatcctgacggaaacaccacaagaattttc
tatgacaatacaggaaacattgtaaaatatgttgagccgggaaattacaatccggagaaa
gatgacggagtgggtactacatatctttatgactcaatgaaccgtcttatacagatagta
aatgctgcaggaatagtggtggaaaagaatatatacaatactgcgggagaaataatcaag
aaaattgactcagtaggttataaatccgcagataatgacaatgacaggcatggagttgaa
tttagttatgacctggcaggacgtttggtggagataacaacgccggaagcgaagattcac
ggacgaaagagccagcaatacacttatgacgcagaaggaaacataacgggaatagttgac
ggaaacggaaacagcacaaggtacagtttggacttatggggtaagataataaacataacg
gaacctgacggaaccaatataaaatacgattacgactatgcgggaaaccttgtgtccact
actgacggtaaccgaaacaccactcggtatacatacaacagcttgaaccttctgtcggag
ataatagaccctgacggaaggaaaataatcttcaagtatgacagacagggaagaatggtg
caaaggatagggaaagacggacacagcacatattacacctacaatgcggacaacaatata
accggctgttgggaagaagaaggacagatggagaggtacgagtataatattgacggaagt
ctggctgcgtcaataagcggtaccactatacatacttatacctataccttggcagggaga
ctgaaaagtaagacaaccaacgggcggaaagtgttggagtatgattataataaaaatggg
tttgtatccaggcttgttgacataagtggaacaccggtggagtatacatatgacgtgctc
ggaagagtagctgcgataacaaatggaggaaagatttccgcaaaatatgaatacaatatt
gacaacacgatagcgcaggtcttgtatgggagcggaatatgcgcgagatatgaatatgac
ctggataagaatataacgaggcttttgaatacagacccgacaggaaaagagatgtttgtg
tacaaatatgcctatgacggaaatggaaatccgattttgaaggaagagaacggaaaagta
acggcctacggctatgatgcactaaaccgcttgcaggaagtgatataccctggaaatgta
aaagagagatttacgtatgatgcgaacggcaacaggctcaagagagagttcagagacata
ttggagcaatatgagtatgataattgcaatagattgattcaaaggataaaaaatggactg
gtaacggaatatgaatatgacgaaaaaggaaatttgataaaagaaaaagaaggtgagttg
actaaattatacagctatgacggatttgacagactgatacgtgtgcagaatcccgacgga
acatatatggagaatatatatgatgccgaggatttgagaacgatatcgatagaaaacgga
agatacaacagatatatatacagcggaagaaatatagcgtgtgaagtagacgaggactgg
agactgaaagacagaatagtgcgagggcatacgatattgcaaaaagaggacggcaataag
aatgcttactattatattcacaattctcatggagatattaccgctcttactgatgataaa
gggaaaatagcaaacgcttacagttatgatgcttttggaaatatattggacagtgttgag
agagtagataatagattcaagtattcaggcgaagtgtatgattctgtagcaggtcaatat
tacctgagggcaagatactataatccgagtatagggagatttatacaggaagacccattc
agaggcgatggacttaacttatatgcctatgttgccaataatcctgtaaggtacattgac
ccgaccggtaactgcaaagaaggtgttaactttaataacaaccttgaggaaacgacaaaa
gtgattgttgaaaaaaatgaaagtaaaggcaattcggtttgggatatagtaaaggatatt
tttgtagatacaattgagggtgctgtagacgagataatagcaaagaaagttattgagaga
ttacctaattattcagcaaaaacattgatggggcatgcaaaatttggttatgcttttgag
gcaacaaaggttaaacctatacctggggttaagggactaaaatcattttcaaaagttgca
ggccctgttgcagttatggtgtatggatacgaagtttatcaggatataaaaaaatacgat
ggctgggatgcggttaaggctattacggtaactacagtagcaacggcagtaacatttttg
gctggctttattttagcacaagctgctcttccggtagttgcaactcttattgtgagtgct
gcagtgggtattgctattggattttttgcagattgggttaagaaaaaatggataggttat
taa
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