Acetivibrio thermocellus ATCC 27405: Cthe_0315
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Entry
Cthe_0315 CDS
T00474
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
cth
Acetivibrio thermocellus ATCC 27405
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cth03021
]
Cthe_0315
Transcription machinery [BR:
cth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cthe_0315
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
DUF7809
Motif
Other DBs
NCBI-ProteinID:
ABN51553
UniProt:
A3DC74
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All DBs
Position
397923..398672
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AA seq
249 aa
AA seq
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MHGLFVNKKKNDTGSTALVLKKIQSGDTKLKEEFIKDNVPYIIRTISNILGIVVDDRNSE
EFSIGLAAFNEAIDRYDADKNGNFYTYSFVVIKSRLYDFIRRNRKHNNVLPFSYIEESTR
VDERLLMSDASGQFEKIEVRQELVSFEKSLKEFGISLEDLVLSSPKHKDSRLLLIKIARI
IADDDNMFRKLVEKKYIPMKEVLSRIKVNHKTIQRNRKFIIAVSLILRSNLYDLKEYVQG
FEREGKYHG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
ttgcatgggttgtttgtaaataaaaagaagaatgacactggttctacagcacttgttctt
aaaaagattcaaagcggggacacaaaacttaaggaagaatttattaaagacaatgttccg
tatattataagaacgatttcaaatatacttgggatagttgtggatgacagaaacagtgag
gaattcagcattggacttgcagcttttaatgaagccattgacagatatgatgccgataaa
aacggcaatttctatacctattcttttgtagttataaaaagccgcttatatgattttata
agaagaaacaggaaacacaacaatgttttgcctttttcatatattgaagaatcaactcgg
gtggacgaaagattattgatgtccgatgccagcggtcaattcgaaaaaattgaggtaagg
caggaactggtcagctttgagaaaagcttaaaggaatttggaatttccctggaagacttg
gtgttatcctctccgaaacataaggattcaaggcttttattgataaaaatcgcaagaata
attgctgatgatgacaatatgttcagaaagctggtcgaaaagaagtacatacccatgaaa
gaagtattaagccgaataaaagtaaatcacaagacgattcagaggaacaggaaatttata
attgctgtcagcctgattttacgaagtaatctatacgatctcaaagagtatgtgcagggc
ttcgaaagggagggaaagtatcatggataa
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