Acetivibrio thermocellus ATCC 27405: Cthe_0460
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Entry
Cthe_0460 CDS
T00474
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cth
Acetivibrio thermocellus ATCC 27405
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cth03032
]
Cthe_0460
03400 DNA repair and recombination proteins [BR:
cth03400
]
Cthe_0460
Enzymes [BR:
cth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Cthe_0460
DNA replication proteins [BR:
cth03032
]
Prokaryotic type
DNA Topoisomerases
Cthe_0460
DNA repair and recombination proteins [BR:
cth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cthe_0460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DNA_ligase_ZBD
Toprim_4
HypA
Rpr2
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-ProteinID:
ABN51698
UniProt:
A3DCL9
LinkDB
All DBs
Position
574145..576253
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AA seq
702 aa
AA seq
DB search
MADKLIIVESPAKAHTIGKFLGKDYKIVASVGHVRDLPKSQMGVDIENDFTPKYITIRGK
GEIISKLKKEAKNASTIYLATDPDREGEAISWHLATLLNIDKNEKCRITFNEITKNAVKN
AIKSPREINMDLVDAQQARRVLDRIVGYKISPLLWKKVKKGLSAGRVQSVATRLICDREE
EIEKFVPEEYWTITAKLLKGGVKAPFEAKFYGLDNKKTELKSEEEVNKVLDEIKDAVFVV
QKVKKGEKKKNPNAPFTTSTMQQEASRKLGFSTKKTMMVAQQLYEGIEVKGVGAVGLVTY
IRTDSTRISEEAQNQAAKYIKEKFGESYLPKEKNVYKNKSASQDAHECIRPTSVEMDPES
VKDSLTKEQYRLYKLIWDRFVASQMAPAVYDTINADIEAGKYLFKASGSTVKFPGFTVLY
QEDKDDETEEGEVIVPELAEGESLKLKKLEPRQHFTQPPPRYTEASLVKALEEKGIGRPS
TYAPIITTILARGYVVKEGKTLVPTELGKIVTDIMKNYFQDIVDVEFTAQMEKTLDEVEE
GEKRWVDVMRSFYSQFVDVLKNAEEKIGNIEVPEEVTDEICEKCGRNMVIKVGKKGRFLA
CPGFPECRNAKPILEDAGVTCPKCGGKVYIKKTRKGRKYLGCENNNSDPKCDFMTWDMPS
KENCPKCGSFLLKKYSGRKVQLKCSNENCDYVKTGKEKKEDE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaattgattattgttgagtctcccgcaaaggcacatactattgggaaattc
ttgggaaaagactataagatagttgcttctgtcggacatgtgagagaccttcccaaaagt
cagatgggggtcgatatagagaatgattttactcccaagtacattacaataagaggtaag
ggtgaaataatttcaaaacttaaaaaagaagcaaagaacgcaagcactatctatcttgca
accgaccctgaccgtgagggtgaggctatttcgtggcatttggctactttgcttaacata
gataaaaatgagaaatgcaggataacttttaatgagataaccaaaaatgctgttaaaaac
gccataaaatcacccagggaaatcaacatggacctggttgatgcccaacaggcaagaagg
gtattggacaggattgtgggatacaagataagtcccctgctttggaaaaaagttaaaaaa
ggattgagtgcaggaagggttcagtcggttgcgacaaggcttatctgcgacagggaagaa
gaaattgaaaagtttgtacctgaggaatactggaccataactgcaaaactcttaaaaggt
ggagtaaaggctccttttgaggccaaattttacggtctggacaataaaaagactgaactt
aaaagcgaggaagaagtaaataaagttctggatgagataaaagacgccgtgtttgtggtt
cagaaagtgaaaaaaggggagaaaaagaaaaatcctaacgcaccgtttaccaccagtacg
atgcagcaggaagcttccaggaaactgggattttccacaaaaaagacaatgatggtggca
cagcagctctatgaaggaattgaagtaaaaggtgtcggggctgtgggtcttgtcacttat
attcgtaccgattccacgagaatttccgaggaggcgcaaaatcaagctgcaaagtatatt
aaagaaaagtttggtgaaagttatcttcccaaagaaaaaaatgtttataaaaacaaatct
gcctctcaggatgcccatgagtgtataagaccgacatcggttgaaatggatcctgagtct
gttaaggattcacttaccaaggagcagtaccgtctgtataagcttatatgggataggttc
gtggccagtcagatggcgccggccgtatacgacactataaatgcggatattgaagccgga
aaatatcttttcaaggcaagcggctccactgtaaagtttcctggatttacggtcctgtat
caggaagacaaggacgatgaaacggaagaaggagaggtcattgttccggagcttgcggaa
ggggaaagcttaaagcttaaaaagcttgaacccagacaacatttcacccagccgccgcca
aggtatacggaagcaagcctggttaaggctttggaagaaaaaggcataggaagaccgagt
acttacgcccccatcattacaaccattttggcccggggttatgtggtgaaggaaggcaag
acattggttccgaccgagctcgggaaaatcgttacggatattatgaaaaactattttcag
gatatcgtggatgtagagtttacggctcaaatggagaaaacgcttgatgaagtggaagag
ggcgaaaaaagatgggtagatgtcatgagaagcttttactcccaatttgttgatgttctg
aaaaatgcggaggaaaagataggcaatattgaagttcccgaggaagtaaccgatgagatt
tgtgaaaagtgcggaagaaacatggtaattaaagttggaaagaaaggaagatttttggcg
tgtcccggttttccggagtgcagaaacgccaagcctattttggaggatgcgggtgtaacc
tgtcctaaatgcggcggtaaagtgtacattaaaaagacgcggaaaggcaggaaatatctt
ggttgtgagaataacaacagcgatcccaaatgcgattttatgacttgggatatgccgtca
aaagaaaactgcccgaaatgcggaagttttttgcttaaaaagtattccggcaggaaggta
cagctaaaatgcagcaatgaaaactgtgattatgtaaaaacggggaaagaaaaaaaggaa
gatgaataa
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