Acetivibrio thermocellus ATCC 27405: Cthe_0534
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Entry
Cthe_0534 CDS
T00474
Name
(GenBank) ABC-type bacteriocin transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
cth
Acetivibrio thermocellus ATCC 27405
Pathway
cth02010
ABC transporters
cth02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cthe_0534
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cthe_0534
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cth01002
]
Cthe_0534
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cth02000
]
Cthe_0534
Peptidases and inhibitors [BR:
cth01002
]
Cysteine peptidases
Family C39
Cthe_0534
Transporters [BR:
cth02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Cthe_0534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
nSTAND3
AAA_22
SMC_N
AAA_25
AAA_18
NACHT
AAA_16
Sigma54_activat
ATPase
AAA_24
AAA
AAA_14
AAA_29
DUF87
AAA_13
Rad17
ATP-synt_ab
Sigma54_activ_2
AAA_7
DLIC
RsgA_GTPase
NB-ARC
MobB
AAA_23
Zeta_toxin
TsaE
DUF7237
Motif
Other DBs
NCBI-ProteinID:
ABN51770
UniProt:
A3DCU1
Structure
PDB
PDBj
LinkDB
All DBs
Position
651489..653672
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AA seq
727 aa
AA seq
DB search
MLRRLFKKKYVCVRQYDLTDCGAACLSSIAQYYGLKMSLAKIREMTGTDTQGTNAYGLIH
AAKQLGFSAKGVKASKEDLLKDFRLPAIANVIVDNRLAHFVVIYSIKNRIITVADPGKGI
VRYSMDDFCSIWTGGLVLLEPGEAFQKGDYTQNMMVKFAGFLKPLKKTVLCIFLASLLYT
ALGIAGSFYIKFLFDDLIKFEKLNDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDK
SIMMEYYSHVLKLPMNFFNSRKVGEIISRFMDASKIRQAISGATLTIMIDTIMAVIGGIL
LYIQNSSLFFISFIIILLYGIIVTVFNKPIQNANRQIMEDNAKLTSALVESVKGIETIKS
FGAEEQTEKSTRDKIETVMKSSFKEGMLYINLSSLTGIVAGLGGIVILWAGAYNVIKGNM
SGGQLLAFNALLAYFLTPVKNLIDLQPLIQTAVVASNRLGEILELATEKELREDSDDFVI
SLKGDIEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEK
GDILINGHSIKNISLELIRKKIAFVSQDVFIFSGTVKENLCLGNENVDMDEIIKAAKMAN
AHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDEATSNLDSITENH
IKDAIYGLEDDVTVIIIAHRLSTIVNCDKIYLLKDGEIVESGSHTELIALKGCYFKMWKQ
TENTLAS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggcgtttgttcaaaaaaaagtatgtatgcgtaaggcaatatgatttgacagac
tgtggagcagcctgtttgtccagtattgcccaatattacgggttaaaaatgtcccttgca
aagatacgtgagatgacaggcaccgatacccagggcacaaatgcctatggtttaattcat
gctgcaaagcaactggggttttcagcaaaaggtgttaaggcctcaaaagaggatttgctg
aaagattttaggcttccagccatagcaaatgtaattgttgacaacaggcttgctcatttt
gtagtgatttattcaattaaaaacaggataattacggttgccgaccctggcaagggaatt
gtcaggtatagtatggatgatttttgttcaatttggaccggtgggcttgttttgctggag
cccggcgaagctttccaaaaaggggattatacccaaaatatgatggtgaaatttgcaggt
tttttgaagcctttaaaaaaaaccgtactgtgtatatttttagcttcgcttttatatact
gctttaggaattgcaggctccttttatatcaagtttttgtttgacgaccttataaaattt
gaaaagcttaacgaccttcatataatttccgcaggatttgctgttatatttttacttcag
atatttcttaattattacagaagcatacttgttaccaaacttggaatgagcattgacaag
tccataatgatggagtattactcccatgtgttaaagcttcccatgaattttttcaattcc
agaaaagttggggagataatttcaagatttatggatgcttcaaaaatacgacaggcaatt
tccggagcaacccttaccataatgattgatacaattatggccgttatcggaggaattctt
ttatatatacaaaactcttccctgttctttatatcttttatcatcatattgctgtacgga
ataattgtgacggtgtttaacaaaccgattcagaatgctaacaggcaaataatggaggat
aatgcaaaattaacttcggcgctggtggagtcggttaaagggattgagacgataaaatcc
tttggtgccgaggaacagaccgaaaaaagcaccagagacaaaattgaaactgtaatgaaa
agctcttttaaagaagggatgctgtacataaatctttcttccctgaccggtattgttgcc
gggcttggaggtattgtaatactctgggccggtgcatacaatgtcataaagggaaacatg
agcgggggacagcttcttgcttttaatgcactgttggcatattttctcacacctgtgaaa
aacttaattgatcttcagccgcttatacaaacggcggtggtagcctccaacaggcttgga
gagatacttgaacttgccactgaaaaggaactgagagaagacagtgatgattttgtcata
tcattaaaaggagacattgaatttaggaatgtggattttcgctacggattaagaaagcct
gtgctaaaaaacattaatttaaccataccaaaagggaaaacggtagccatagtaggtgag
agtggttccgggaaaactactctggcaaagcttttgatgaatttttacagtccggaaaaa
ggggacattttgataaacggacacagtataaaaaatataagtttggagttgattagaaag
aaaatagcttttgtttcacaggatgtctttattttcagtggtactgtaaaagaaaatctt
tgtcttggcaatgaaaatgttgatatggatgagattataaaagcggctaaaatggcaaat
gcccatgattttatagaaaaactgcccctaaaatatgatacttttttgaatgaaagcgga
gcaaatctttccgaagggcaaaaacaaaggctggcgatagcaagggcactgcttaaaaaa
ccggatattttgatactcgacgaggcaacaagcaatttggacagcatcaccgaaaaccat
atcaaggatgcaatatacggtttggaagatgatgtaacggttattataatagcccacagg
ctgagcacaatagtaaactgtgacaaaatatatctgctaaaagacggtgagatagtggag
agtggctctcacaccgagcttatagcgttaaaaggttgttattttaagatgtggaaacag
acagaaaacactttggcttcgtaa
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