Acetivibrio thermocellus ATCC 27405: Cthe_0944
Help
Entry
Cthe_0944 CDS
T00474
Name
(GenBank) Rad50 zinc hook domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cth
Acetivibrio thermocellus ATCC 27405
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cth03400
]
Cthe_0944
DNA repair and recombination proteins [BR:
cth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cthe_0944
Archaeal homologous recombinant proteins
Cthe_0944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_27
Rad50_zn_hook
AAA_29
AAA_21
SesA
Fzo_mitofusin
Laminin_II
Filo_VP35
MobC_2
ZNF380_CC
Occludin_ELL
Prefoldin_2
Motif
Other DBs
NCBI-ProteinID:
ABN52178
UniProt:
A3DDZ9
LinkDB
All DBs
Position
complement(1130692..1132143)
Genome browser
AA seq
483 aa
AA seq
DB search
MITIKRIRIENFQSHKDTELSFSDGLNVIVGPSDQGKSAIIRAIKWVLYNEPRGTDFIRQ
GTNSARVTLELSNGYVITRERAPNKNRYTLKDPDGNVSVFEGFGNEVPLEIVKAHGIPKV
ALDMDVRASLNIGEQLEGPFLLSESGATRAKAIGRLTGLHIIDQAIKDCATDIRRENQTC
DRIEREIEDIDKKLEEYKNIEELGRRLEESEKVIARMEALTAKVDMLEEKKNSLKDIETE
YLAQTKILSRLDRLEECGVYLKSAEACFFKLNQILGIKKRYSEVLTGMEEMEKVLQKTSF
VDEAVEILKKASDIFSKYEKLDRLRSEFSNVGRELNQTKNILDRTSNVKELDFMIKNISD
KVLLGSEITQLREKLVCLEREISRVKKNISSYENINLVQEIVTSVDKKLEVLNKLEAAKK
EYSAVCTSLNDGLEFMDKNKKEIQENLNIYIDILRKSGVCPLCKSSIGDEKLENIIRHYE
EVH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgattacgataaaaaggataagaattgaaaatttccagtcacacaaggatacggaactt
tctttttccgacgggctcaatgtcatcgtgggaccgtcggaccagggtaagtctgccatt
atccgggctattaaatgggtattgtataatgaacccagagggactgattttataaggcag
ggaacaaattctgcaagggttactttggagcttagcaacggatatgtcataacaagggaa
agggcacctaacaaaaacagatatacgctcaaagaccctgacggaaatgtcagtgtgttt
gaagggttcggaaatgaagtgcctctggaaattgtaaaggctcatgggattccaaaagtg
gctttggacatggatgtccgtgcaagtctcaacataggagagcagcttgaaggaccgttt
cttttgtcggaatccggtgccacccgggcaaaagccattgggagacttaccggacttcat
atcattgaccaggcgataaaggattgtgccacggatataagaagggaaaaccagacttgt
gacaggattgaaagagaaattgaagatattgacaaaaaacttgaagagtataaaaatata
gaagaattgggaagaagactcgaagagtccgagaaagtaatcgcccggatggaagctttg
acggcaaaagttgatatgcttgaggaaaagaagaattccctcaaagacattgagactgaa
tatttggctcaaaccaaaattctttcaaggcttgacaggctggaagagtgcggtgtgtat
ttaaaaagtgcggaagcctgctttttcaagctaaatcagatactgggaataaaaaagagg
tattcagaggttttaaccggaatggaagaaatggaaaaggtattgcaaaaaacaagcttt
gtggatgaggcagtggagattttgaaaaaggcatctgatattttctcaaaatatgaaaaa
cttgacagattgcgttcggagtttagtaatgttggcagggaacttaaccagacaaaaaat
atcctggacaggacgtcaaatgtgaaagaacttgattttatgataaaaaatatttctgac
aaggttttgcttggctctgaaattactcagttgcgggaaaagcttgtttgccttgaacga
gagatatccagggtcaaaaagaacatatcctcttacgaaaatataaatttagtgcaggag
attgtgacttctgttgataaaaagctggaagtgttaaacaaactggaagcagccaaaaag
gagtacagtgctgtttgtaccagtctgaatgacggtttggagtttatggacaaaaataaa
aaagaaatacaggagaatcttaacatatatatcgatattcttagaaaaagcggagtgtgt
ccgctttgcaagagcagtatcggagatgaaaagcttgaaaacataataaggcattatgag
gaggtacactga
DBGET
integrated database retrieval system
