Acetivibrio thermocellus ATCC 27405: Cthe_0988
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Entry
Cthe_0988 CDS
T00474
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cth
Acetivibrio thermocellus ATCC 27405
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cth03016
]
Cthe_0988
Enzymes [BR:
cth01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Cthe_0988
Transfer RNA biogenesis [BR:
cth03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cthe_0988
Prokaryotic type
Cthe_0988
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
4HB_MCP_1
Motif
Other DBs
NCBI-ProteinID:
ABN52220
UniProt:
A3DE41
LinkDB
All DBs
Position
complement(1181644..1182537)
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AA seq
297 aa
AA seq
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MNGILNVLKPPGMTSFDVVAYLRGILKIKKIGHTGTLDPGAAGVLPVCTGKATKAIEYLS
DKDKVYRAELLLGVSTDTQDSYGEVIREQEVKASVEDIEKVIKSFEGDYSQLPPMYSAVK
MNGKKLYELARSGIEVERTPRKVKIHFINILSIRGNRVVFDVGCSKGTYIRTLCSDVGDK
LGCGGHMGFLVRLKSGSFDIKNALTLEEIKETAEKGNPEEILTSIDKVFSDYDKIYLNEK
DKKRFLNGGFVTLGKYGKFALTQKVRVYDKDGAFLALGEAVLNKSEELSLKIDKLFV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaatattgaatgttttaaaaccaccgggtatgacttcctttgatgtggtggca
taccttaggggaatcctgaaaataaaaaaaatcggacacacaggcacgcttgaccccggt
gcggcaggagtgcttcctgtttgtacaggcaaggctacaaaagcaattgaatatctttcg
gataaagacaaagtttacagagcggagcttttgctgggtgtatccactgatacccaggat
tcttatggagaagttataagagagcaggaagtaaaggcttccgttgaagatattgaaaag
gtaattaagtcttttgaaggggactacagtcagcttcctcccatgtattcggcagtcaag
atgaacgggaagaagctgtatgagcttgccagaagcggcattgaagtggaacggactcca
agaaaggttaaaatacattttattaatattttaagtatccgaggcaacagagttgttttt
gacgtgggatgttccaaaggcacttatataagaactttatgttccgatgtcggagacaaa
ttaggctgcggaggacatatgggttttctggtaaggctgaaatcgggaagttttgacatt
aaaaatgctttgactctggaagagataaaagaaacagccgagaaaggaaaccctgaagag
attctgacaagtattgataaagtttttagcgattatgataaaatttatcttaatgaaaag
gataaaaagagatttttgaacgggggatttgtaactctcggaaaatacggtaagtttgct
ttgacccaaaaagtcagagtatatgataaggacggtgcttttctggctttgggggaagcg
gttttgaacaaaagtgaagagttgagtcttaaaattgacaagctttttgtataa
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