Acetivibrio thermocellus ATCC 27405: Cthe_1066
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Entry
Cthe_1066 CDS
T00474
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cth
Acetivibrio thermocellus ATCC 27405
Pathway
cth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cthe_1066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cth03400
]
Cthe_1066
DNA repair and recombination proteins [BR:
cth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cthe_1066
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cthe_1066
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF5659
DUF2175
DUF5580_C
Motif
Other DBs
NCBI-ProteinID:
ABN52298
UniProt:
A3DEB9
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Position
complement(1273444..1274199)
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AA seq
251 aa
AA seq
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MNYLKTSGIVIKEVNTGEADRIITIFSKNKGKISALAKGARRPKSHLVAGTQLLCYSEFV
LFKGKDMYTVNSCDVIESFYDIRNDLERLTYAAHMMDIVNDVILENQPASRLLQLFLNSL
YMLSKTDRSPLQIVRVFEIRLLSTMGYAPWVSSCIKCGSTVFDSMYFSFLKCGFLCSKCL
ENDKGALKISEGAAKALNYIVHSKMSNLFSFEVSESVLDELGKVSQRYMKERLEKNYTKL
DFIKTLDRIKC
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaattatttaaaaacttcagggatagttataaaagaagttaatacgggggaagctgac
agaataataacaatattttccaagaataaaggcaagatatccgctttggcaaaaggtgca
agaagaccgaaaagtcacctggttgcagggacacaattattatgctacagcgaatttgtt
ctctttaaaggcaaagacatgtataccgtcaatagctgtgatgttattgagtctttttat
gatatccgaaatgatcttgaaagattaacatatgctgcccatatgatggatatagtaaat
gatgtaattttggaaaatcagcctgcatccaggttgttgcagctttttttaaactcattg
tacatgctttcgaaaacagacaggtcgccgctgcaaatagtaagagtgtttgaaataaga
cttctttcaacaatgggatatgcgccgtgggtgagcagctgtataaaatgtggcagcacc
gtttttgacagtatgtatttcagtttcttaaaatgcggatttttgtgcagcaaatgcctt
gaaaatgataaaggagcattaaaaatttccgaaggtgccgcaaaggcactaaattacata
gtgcacagtaaaatgagcaatttgttcagttttgaggtatcggagagtgtgttggacgaa
cttggcaaagtttcacaacggtatatgaaagaaagacttgaaaaaaactacaccaagctg
gattttatcaagactcttgacaggataaaatgctaa
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