Acetivibrio thermocellus ATCC 27405: Cthe_1272
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Entry
Cthe_1272 CDS
T00474
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03093
RNA polymerase sigma-I factor
Organism
cth
Acetivibrio thermocellus ATCC 27405
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cth03021
]
Cthe_1272
Transcription machinery [BR:
cth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cthe_1272
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
ABN52504
UniProt:
A3DEX5
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All DBs
Position
1547995..1548732
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AA seq
245 aa
AA seq
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MLFVSAIIDYAGETATHIVEKIKNGDKHLKEKFIKDYIPFILNIVSSFYSSKTGDLKSSD
EYSIGLMAFNEAIEKFDVNKSKSFLKFAEMVIKKRMIDYFRKTSSIGRKEIPFSYFNSNN
ETEFRKKINNLDIEEEFNSYEFICELRDFSKKLESFGLSINNLPDYMPKHKDSREMCINI
AKKIVENKSIFDKLKTKKYIQMKELSKIIDVHPKTVERNRAFIICLCILFDNDYGNFKSY
LNKIF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgctatttgtttctgctattatagattatgccggtgaaacagcaactcacattgttgaa
aaaatcaaaaacggggacaagcatttaaaagaaaagttcattaaagattatatcccgttt
atattaaatattgtttcaagcttctactcttcaaaaacaggagatctaaaaagcagcgat
gaatatagtattggcttgatggcctttaatgaggctatcgaaaaatttgatgttaataaa
agcaaaagttttctcaaatttgcagaaatggttataaaaaagcgaatgatagactatttt
agaaaaacatcctcaatcggcagaaaagaaatccctttttcctattttaacagcaataac
gaaactgaatttagaaaaaaaataaataaccttgacatcgaagaggaatttaacagttat
gaatttatttgcgaattaagggacttttccaaaaaacttgaaagctttggacttagcata
aacaatttgcctgattacatgcccaaacacaaagactcaagagaaatgtgcataaacata
gccaaaaaaatagttgaaaacaagagtatttttgacaaattaaagacaaaaaagtacata
cagatgaaagagctttccaaaataattgatgttcatccaaagaccgttgaaagaaacagg
gcttttatcatatgtttatgtatattatttgataatgattatggaaactttaaatcgtat
ttaaataaaatattttaa
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