Acetivibrio thermocellus ATCC 27405: Cthe_2120
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Entry
Cthe_2120 CDS
T00474
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
cth
Acetivibrio thermocellus ATCC 27405
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cth03021
]
Cthe_2120
Transcription machinery [BR:
cth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cthe_2120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ABN53327
UniProt:
A3DH98
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(2518811..2519572)
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AA seq
253 aa
AA seq
DB search
MDWHFQGTNDDREHTKRIIIEYLNRIKAGDDSAREEFILRFRPFILKLVYKATDRHVEPE
NSEEYSVALLAFNEAINAYDEEKHSNFLVFSEQVINRRLIDYKRKNHKNKMVYPFSYFEN
EDIKLERTLSDADGNNAIERLEFTDEIRLFKSELASFDITFKDLLSCTPKHRDSRELLIN
IAKKIASNDGLYEKLKKTKKLPTLELLKLAKVSRRTIERNKKYIIAVSLILRSNLEIFKE
YAAGIQEKEVDLR
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtggattggcattttcaaggtacgaacgacgacagggaacatacaaaaaggattattata
gagtatctgaacagaataaaagccggggatgattctgcaagggaagagtttatcctgagg
tttaggccttttatattaaaattggtgtataaggcgactgacaggcatgttgagccggaa
aacagtgaagaatacagcgttgcattattggctttcaatgaagccatcaatgcttatgat
gaagagaagcattctaacttccttgttttctcagaacaggttattaatagaagacttatt
gactataaaagaaaaaatcataagaataaaatggtttatcctttttcttactttgaaaac
gaagatatcaaacttgaaagaactctttcggatgctgacggcaacaatgcaattgaaaga
ttggaatttacggacgagattagacttttcaaatctgagctggcctcctttgatataact
tttaaggatttgctctcctgtactccaaagcacagagattcgagagagcttttgataaat
attgcaaaaaaaattgcaagtaatgacgggctttatgaaaagctaaaaaaaaccaaaaag
ttgcccacattggaactgttgaaactggcaaaagttagcagaaggactatagaaagaaat
aaaaaatatataattgcagtaagcttgatattaaggagcaacctcgaaatcttcaaggag
tatgctgcaggtatccaggaaaaggaggtggatttgcggtga
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