Acetivibrio thermocellus ATCC 27405: Cthe_2144
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Entry
Cthe_2144 CDS
T00474
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cth
Acetivibrio thermocellus ATCC 27405
Pathway
cth03030
DNA replication
cth03430
Mismatch repair
cth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cthe_2144
03430 Mismatch repair
Cthe_2144
03440 Homologous recombination
Cthe_2144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cth03032
]
Cthe_2144
03400 DNA repair and recombination proteins [BR:
cth03400
]
Cthe_2144
Enzymes [BR:
cth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cthe_2144
DNA replication proteins [BR:
cth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cthe_2144
DNA repair and recombination proteins [BR:
cth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cthe_2144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
AAA_30
AAA_5
TIP49
RuvB_N
AAA_18
AAA_14
AAA_19
Mg_chelatase
TniB
AAA_2
ORC-CDC6-like
AAA_24
AAA_assoc_2
zf-RING_12
PIF1
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
ABN53348
UniProt:
A3DHB9
LinkDB
All DBs
Position
complement(2547344..2548987)
Genome browser
AA seq
547 aa
AA seq
DB search
MSYLALYRKWRPLVFEDVVEQEHVVRTLRNSICSGRIAHAYLFCGTRGTGKTTMAKIFSR
AVNCLNPKDGDPCNQCEICQGILNGSLLDVIEIDAASNNSVDDIRVLRDEVIYTPSKARY
KVYIIDEVHMLSTGAFNALLKTLEEPPAHVIFILATTEPHKLPATILSRCQRFDFRRIPV
DSIVKRIEYIAKESGVEIRREASKLIAKLSDGALRDAISILDQCISLGSKELTYEDVLSV
VGLVTDTFIAEVVDAIKNKEVGRVLNAVDELVMEGKNIGQFVSELVMYYRNLMICSSLSN
PEDIIDASADSIQRMKEQCKGLELFEIVTVIKELSSLEAALKWSTHPRVLLETTLIKLCE
NRLDPGDAGVLERIRLLEKNVNDILEKGVAIPQNGSDGSGGSQKDSGSVDSDEKNSSPEV
NERIEKKNIAKNVKGIEVWGKVLDELKSRGRMAVYAYLLDTKLIELGSNQVGIVFKNNGC
KMLVEKSENLEVIEECLRECLGKEVRVKCFDEEDIVDTGKNDEEDKLVEKAQDFAQKFDV
EVNIIDE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatatctggctttgtatagaaaatggaggcccttggtttttgaagatgtggttgaa
caggaacacgttgtaagaacgcttaggaacagcatctgctccggacgtatagctcatgca
tatctcttctgcggtacgagaggtacaggaaaaaccacaatggcaaaaatattttcgaga
gccgtaaactgtttgaatccaaaagacggtgacccgtgtaatcagtgtgagatttgccag
gggatacttaacgggagtcttttggatgtcatagaaatagatgctgcttcaaacaacagt
gtggatgatataagggttctcagggatgaagttatatatacaccttcgaaagccagatac
aaagtttatattattgacgaagttcacatgctttcaacaggcgcgtttaatgccctttta
aagacacttgaagagcctccggcccatgtgatatttattcttgccaccaccgaaccgcac
aagcttcctgcaaccatactgtcccgctgccaaaggtttgatttcagaagaattccggtt
gacagtattgtaaagagaattgagtatattgcaaaagaaagcggagtggaaatacgaagg
gaagcttccaaattgatagcaaagctatccgacggtgctttaagggatgccataagcata
ttggatcagtgcatatccttgggaagcaaggagctgacctatgaggatgtcttgtctgtg
gtaggccttgtgacagatacttttatcgctgaggttgtggatgccataaaaaacaaagag
gtaggcagagtgttgaatgccgttgatgagctggtgatggagggcaagaatatcggccag
tttgtttcggagctggtgatgtattacaggaatttaatgatttgcagttcgctatcaaat
cccgaagatataattgatgcctctgcggactcaattcaaagaatgaaggaacaatgcaaa
ggtttggagttgtttgagattgtaacggtgataaaggagctgtcttcactggaagcggcg
ttaaaatggtccacacatcccagggttcttttggaaacaacacttatcaagctttgcgaa
aacaggttggacccgggagatgccggggtattggagagaatccggctgcttgagaagaat
gttaatgatattttggaaaagggtgttgccataccccaaaatggttctgacggttcgggc
ggttctcaaaaggattccggaagtgtggattcggatgaaaaaaattcgtcacctgaagtt
aacgagcgtattgaaaaaaagaatattgcaaaaaatgtaaagggaattgaagtgtggggc
aaggtgctggacgagctgaaaagcaggggcagaatggctgtatatgcctatcttttggat
accaaacttatagagttgggttccaaccaagtcgggatagtatttaaaaataacggctgt
aaaatgcttgttgaaaagtccgagaaccttgaagtgatagaagagtgccttcgcgaatgc
cttggaaaagaggtcagggttaaatgttttgacgaagaggacattgttgatacaggaaaa
aatgatgaagaggacaagctggttgagaaagcgcaggattttgctcaaaagtttgatgtt
gaggtcaatataattgacgaataa
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