Acetivibrio thermocellus ATCC 27405: Cthe_2900
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Entry
Cthe_2900 CDS
T00474
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
cth
Acetivibrio thermocellus ATCC 27405
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cth03021
]
Cthe_2900
Transcription machinery [BR:
cth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cthe_2900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_3
Sigma70_r4_2
HTH_28
MarR
KORA
AbiEi_4
HTH_31
DUF1492
Trp_repressor
DUF134
YlmH_1st
Sigma70_ECF
HTH_37
HTH_19
Halogen_Hydrol
Motif
Other DBs
NCBI-ProteinID:
ABN54098
UniProt:
A3DJG9
LinkDB
All DBs
Position
3425716..3426474
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AA seq
252 aa
AA seq
DB search
MMDDAVNNNNVVNDSDELFREYKETKSVEVRNKIVSKYLYLSDILAKKFLNRGIDYEDIY
QVASIALIKAVERFDPDKGVKFISFATPTIIGEIKRYFRDKGSVIRIPRRIYEVYQKINH
ARESLTQELKRPPRIDELARHLNISEESVVEIIESYNAYNIQSFSQNVYANDELELHEVI
GDQDSTFERIENRDFLEKSLDKFSDVEKEFISMRYFDNKTQKDIAQKMGVSQMYISRLER
KVLEKFRRMLAK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgatgcagtaaacaataacaatgttgtaaatgacagcgatgagttgtttaga
gaatataaagagacaaaaagtgttgaggtaagaaacaaaattgtaagcaaatatctttat
ctttcggacatacttgccaaaaaatttttaaacagaggcattgattatgaagacatttat
caggtggcttccattgccttgattaaagcggtggagagatttgatcccgacaagggtgtt
aaatttataagttttgcaacacccactattatcggcgaaataaaaagatatttcagggac
aagggttccgttatcagaattcccagaagaatatatgaggtttatcagaagattaaccat
gccagggagtcattgactcaggaattaaaaaggcctccgaggatagatgagcttgcccgg
catttaaatatcagtgaagaaagcgttgttgaaattattgaatcctacaacgcttataat
atccagtccttcagtcagaatgtgtatgccaacgatgagttggagctccatgaagttatc
ggtgatcaggattccactttcgaaagaattgagaacagggattttcttgaaaagagtctt
gataaattcagcgatgttgagaaagaatttatcagcatgaggtattttgacaacaagact
cagaaagacattgcccaaaagatgggcgtatcgcagatgtatatttccaggcttgaaaga
aaggtactggaaaaattcaggagaatgctggcaaaatag
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integrated database retrieval system
