Acetivibrio thermocellus ATCC 27405: Cthe_3077
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Entry
Cthe_3077 CDS
T00474
Name
(GenBank) cellulosome anchoring protein cohesin region
KO
K20276
large repetitive protein
Organism
cth
Acetivibrio thermocellus ATCC 27405
Pathway
cth02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cth00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cthe_3077
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin
CBM_3
Ig_TPPC8_3rd
Dockerin_1
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
ABN54273
UniProt:
Q06851
Structure
PDB
PDBj
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All DBs
Position
3619516..3625077
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AA seq
1853 aa
AA seq
DB search
MRKVISMLLVVAMLTTIFAAMIPQTVSAATMTVEIGKVTAAVGSKVEIPITLKGVPSKGM
ANCDFVLGYDPNVLEVTEVKPGSIIKDPDPSKSFDSAIYPDRKMIVFLFAEDSGRGTYAI
TQDGVFATIVATVKSAAAAPITLLEVGAFADNDLVEISTTFVAGGVNLGSSVPTTQPNVP
SDGVVVEIGKVTGSVGTTVEIPVYFRGVPSKGIANCDFVFRYDPNVLEIIGIDPGDIIVD
PNPTKSFDTAIYPDRKIIVFLFAEDSGTGAYAITKDGVFAKIRATVKSSAPGYITFDEVG
GFADNDLVEQKVSFIDGGVNVGNATPTKGATPTNTATPTKSATATPTRPSVPTNTPTNTP
ANTPVSGNLKVEFYNSNPSDTTNSINPQFKVTNTGSSAIDLSKLTLRYYYTVDGQKDQTF
WCDHAAIIGSNGSYNGITSNVKGTFVKMSSSTNNADTYLEISFTGGTLEPGAHVQIQGRF
AKNDWSNYTQSNDYSFKSASQFVEWDQVTAYLNGVLVWGKEPGGSVVPSTQPVTTPPATT
KPPATTKPPATTIPPSDDPNAIKIKVDTVNAKPGDTVNIPVRFSGIPSKGIANCDFVYSY
DPNVLEIIEIKPGELIVDPNPDKSFDTAVYPDRKIIVFLFAEDSGTGAYAITKDGVFATI
VAKVKSGAPNGLSVIKFVEVGGFANNDLVEQRTQFFDGGVNVGDTTVPTTPTTPVTTPTD
DSNAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIEIEPGDIIV
DPNPDKSFDTAVYPDRKIIVFLFAEDSGTGAYAITKDGVFATIVAKVKSGAPNGLSVIKF
VEVGGFANNDLVEQKTQFFDGGVNVGDTTEPATPTTPVTTPTTTDDLDAVRIKVDTVNAK
PGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIEIEPGDIIVDPNPDKSFDTAVYPD
RKIIVFLFAEDSGTGAYAITKDGVFATIVAKVKSGAPNGLSVIKFVEVGGFANNDLVEQK
TQFFDGGVNVGDTTEPATPTTPVTTPTTTDDLDAVRIKVDTVNAKPGDTVRIPVRFSGIP
SKGIANCDFVYSYDPNVLEIIEIEPGDIIVDPNPDKSFDTAVYPDRKIIVFLFAEDSGTG
AYAITKDGVFATIVAKVKEGAPNGLSVIKFVEVGGFANNDLVEQKTQFFDGGVNVGDTTE
PATPTTPVTTPTTTDDLDAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDP
NVLEIIEIEPGELIVDPNPTKSFDTAVYPDRKMIVFLFAEDSGTGAYAITEDGVFATIVA
KVKSGAPNGLSVIKFVEVGGFANNDLVEQKTQFFDGGVNVGDTTEPATPTTPVTTPTTTD
DLDAVRIKVDTVNAKPGDTVRIPVRFSGIPSKGIANCDFVYSYDPNVLEIIEIEPGDIIV
DPNPDKSFDTAVYPDRKIIVFLFAEDSGTGAYAITKDGVFATIVAKVKEGAPNGLSVIKF
VEVGGFANNDLVEQKTQFFDGGVNVGDTTVPTTSPTTTPPEPTITPNKLTLKIGRAEGRP
GDTVEIPVNLYGVPQKGIASGDFVVSYDPNVLEIIEIEPGELIVDPNPTKSFDTAVYPDR
KMIVFLFAEDSGTGAYAITEDGVFATIVAKVKEGAPEGFSAIEISEFGAFADNDLVEVET
DLINGGVLVTNKPVIEGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTELYAVTDANGY
FEITGVPANASGYTLKISRATYLDRVIANVVVTGDTSVSTSQAPIMMWVGDIVKDNSINL
LDVAEVIRCFNATKGSANYVEELDINRNGAINMQDIMIVHKHFGATSSDYDAQ
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtcatcagtatgctcttagttgtggctatgctgacgacgatttttgcggcg
atgataccgcagacagtatcggcggccacaatgacagtcgagatcggcaaagttacagca
gccgttggatcaaaagtagaaatacctataaccctgaaaggagtgccatccaaaggaatg
gccaattgcgacttcgtattgggttatgatccaaatgtgctggaagtaacagaagtaaaa
ccaggaagcataataaaagatccggatcctagcaagagctttgatagcgcaatatatccg
gatcgaaagatgattgtatttctgtttgcagaagacagtggaagaggaacgtatgcaata
actcaggatggagtatttgcaacaattgtagccactgtcaaatcagctgcagcggcaccg
attactttgcttgaagtaggtgcatttgcggacaacgatttagtagaaataagcacaact
tttgtcgcgggcggagtaaatcttggtagttccgtaccgacaacacagccaaatgttccg
tcagacggtgtggtagtagaaattggcaaagttacgggatctgttggaactacagttgaa
atacctgtatatttcagaggagttccatccaaaggaatagcaaactgcgactttgtgttc
agatatgatccgaatgtattggaaattatagggatagatcccggagacataatagttgac
ccgaatcctaccaagagctttgatactgcaatatatcctgacagaaagataatagtattc
ctgtttgcggaagacagcggaacaggagcgtatgcaataactaaagacggagtatttgca
aaaataagagcaactgtaaaatcaagtgctccgggctatattactttcgacgaagtaggt
ggatttgcagataatgacctggtagaacagaaggtatcatttatagacggtggtgttaac
gttggcaatgcaacaccgaccaagggagcaacaccaacaaatacagctacgccgacaaaa
tcagctacggctacgcccaccaggccatcggtaccgacaaacacaccgacaaacacaccg
gcaaatacaccggtatcaggcaatttgaaggttgaattctacaacagcaatccttcagat
actactaactcaatcaatcctcagttcaaggttactaataccggaagcagtgcaattgat
ttgtccaaactcacattgagatattattatacagtagacggacagaaagatcagaccttc
tggtgtgaccatgctgcaataatcggcagtaacggcagctacaacggaattacttcaaat
gtaaaaggaacatttgtaaaaatgagttcctcaacaaataacgcagacacctaccttgaa
ataagctttacaggcggaactcttgaaccgggtgcacatgttcagatacaaggtagattt
gcaaagaatgactggagtaactatacacagtcaaatgactactcattcaagtctgcttca
cagtttgttgaatgggatcaggtaacagcatacttgaacggtgttcttgtatggggtaaa
gaacccggtggcagtgtagtaccatcaacacagcctgtaacaacaccacctgcaacaaca
aaaccacctgcaacaacaaaaccacctgcaacaacaataccgccgtcagatgatccgaat
gcaataaagattaaggtggacacagtaaatgcaaaaccgggagacacagtaaatatacct
gtaagattcagtggtataccatccaagggaatagcaaactgtgactttgtatacagctat
gacccgaatgtacttgagataatagagataaaaccgggagaattgatagttgacccgaat
cctgacaagagctttgatactgcagtatatcctgacagaaagataatagtattcctgttt
gcagaagacagcggaacaggagcgtatgcaataactaaagacggagtatttgctacgata
gtagcgaaagtaaaatccggagcacctaacggactcagtgtaatcaaatttgtagaagta
ggcggatttgcgaacaatgaccttgtagaacagaggacacagttctttgacggtggagta
aatgttggagatacaacagtacctacaacacctacaacacctgtaacaacaccgacagat
gattcgaatgcagtaaggattaaggtggacacagtaaatgcaaaaccgggagacacagta
agaatacctgtaagattcagcggtataccatccaagggaatagcaaactgtgactttgta
tacagctatgacccgaatgtacttgagataatagagatagaaccgggagacataatagtt
gacccgaatcctgacaagagctttgatactgcagtatatcctgacagaaagataatagta
ttcctgtttgcggaagacagcggaacaggagcgtatgcaataactaaagacggagtattt
gctacgatagtagcgaaagtaaaatccggagcacctaacggactcagtgtaatcaaattt
gtagaagtaggcggatttgcgaacaatgaccttgtagaacagaagacacagttctttgac
ggtggagtaaatgttggagatacaacagaacctgcaacacctacaacacctgtaacaaca
ccgacaacaacagatgatctggatgcagtaaggattaaagtggacacagtaaatgcaaaa
ccgggagacacagtaagaatacctgtaagattcagcggtataccatccaagggaatagca
aactgtgactttgtatacagctatgacccgaatgtacttgagataatagagatagaaccg
ggagacataatagttgacccgaatcctgacaagagctttgatactgcagtatatcctgac
agaaagataatagtattcctgtttgcggaagacagcggaacaggagcgtatgcaataact
aaagacggagtatttgctacgatagtagcgaaagtaaaatccggagcacctaacggactc
agtgtaatcaaatttgtagaagtaggcggatttgcgaacaatgaccttgtagaacagaag
acacagttctttgacggtggagtaaatgttggagatacaacagaacctgcaacacctaca
acacctgtaacaacaccgacaacaacagatgatctggatgcagtaaggattaaagtggac
acagtaaatgcaaaaccgggagacacagtaagaatacctgtaagattcagcggtatacca
tccaagggaatagcaaactgtgactttgtatacagctatgacccgaatgtacttgagata
atagagatagaaccgggagacataatagttgacccgaatcctgacaagagctttgatact
gcagtatatcctgacagaaagataatagtattcctgtttgcagaagacagcggaacagga
gcgtatgcaataactaaagacggagtatttgctacgatagtagcgaaagtaaaagaagga
gcacctaacggactcagtgtaatcaaatttgtagaagtaggcggatttgcgaacaatgac
cttgtagaacagaagacacagttctttgacggtggagtaaatgttggagatacaacagaa
cctgcaacacctacaacacctgtaacaacaccgacaacaacagatgatctggatgcagta
aggattaaagtggacacagtaaatgcaaaaccgggagacacagtaagaatacctgtaaga
ttcagcggtataccatccaagggaatagcaaactgtgactttgtatacagctatgacccg
aatgtacttgagataatagagatagaaccgggagaattgatagttgacccgaatcctacc
aagagctttgatactgcagtatatcctgacagaaagatgatagtattcctgtttgcggaa
gacagcggaacaggagcgtatgcaataactgaagatggagtatttgctacgatagtagcg
aaagtaaaatccggagcacctaacggactcagtgtaatcaaatttgtagaagtaggcgga
tttgcgaacaatgaccttgtagaacagaagacacagttctttgacggtggagtaaatgtt
ggagatacaacagaacctgcaacacctacaacacctgtaacaacaccgacaacaacagat
gatctggatgcagtaaggattaaagtggacacagtaaatgcaaaaccgggagacacagta
agaatacctgtaagattcagcggtataccatccaagggaatagcaaactgtgactttgta
tacagctatgacccgaatgtacttgagataatagagatagaaccgggagacataatagtt
gacccgaatcctgacaagagctttgatactgcagtatatcctgacagaaagataatagta
ttcctgtttgcagaagacagcggaacgggagcgtatgcaataactaaagacggagtattt
gctacgatagtagcgaaagtaaaagaaggagcacctaacggactcagtgtaatcaaattt
gtagaagtaggcggatttgcgaacaatgaccttgtagaacagaagacacagttctttgac
ggtggagtaaatgttggagatacaacagtacctacaacatcgccgacaacaacaccgcca
gagccgacgataactccgaacaagttgacacttaagataggcagagcagaaggaagacct
ggagacacggtggaaataccggttaacttgtatggagtacctcaaaaaggaatagcaagc
ggtgacttcgtagtaagctatgacccgaatgtacttgagataatagagatagaaccggga
gaattgatagttgacccgaatcctaccaagagctttgatactgcagtatatcctgacaga
aagatgatagtattcctgtttgcggaagacagcggaacaggagcgtatgcaataactgaa
gatggagtatttgctacgatagtagcgaaagtaaaagaaggagcacctgaaggattcagt
gcaatagaaatttctgagtttggtgcatttgcagataatgatctggtagaagtggaaact
gaccttatcaatggtggagtacttgtaactaataaacctgtaatagaaggatataaagta
tccggatacattttgccagacttctccttcgacgctactgttgcaccacttgtaaaggcc
ggattcaaagttgaaatagtaggaacagaattgtatgcagtaacagatgcaaacggatac
tttgaaataaccggagtacctgcaaatgcaagcggatatacattgaagatttcaagagca
acttacttggacagagtaattgcaaatgttgtagtaacgggagatacttcagtttcaact
tcacaggctccaataatgatgtgggtaggagacatagtgaaagacaattctatcaacctg
ttggacgttgcagaagttatccgttgcttcaacgctactaaaggaagcgcaaactacgta
gaagaacttgacattaatagaaacggcgcaattaacatgcaagacataatgattgttcat
aagcactttggagctacatcaagtgattacgacgcacagtaa
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