Clostridium thermosuccinogenes: CDO33_00305
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Entry
CDO33_00305 CDS
T05300
Name
(GenBank) integration host factor subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
cthd
Clostridium thermosuccinogenes
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cthd03032
]
CDO33_00305
03036 Chromosome and associated proteins [BR:
cthd03036
]
CDO33_00305
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_00305
DNA replication proteins [BR:
cthd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CDO33_00305
Chromosome and associated proteins [BR:
cthd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CDO33_00305
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CDO33_00305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
FIMAH
Phage_Mu_Gam
TFIIB
DUF2267
VWA_3
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
AUS95028
UniProt:
A0A2K2FGQ3
LinkDB
All DBs
Position
77169..77444
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIQSMAEKSELSKKDAEKALNAFLESVEEALAKGDKVQLVGFGSFEVRRRAERKG
KNPQTKEEIIIPASNAPVFRVGKALRDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagagcttatacagagcatggctgaaaaaagtgaattatcaaaaaaggat
gcagaaaaggcattgaatgcttttcttgagagtgttgaggaagcccttgcaaaaggcgac
aaggttcagctggtaggttttggctcctttgaagtaagaagaagggctgagagaaagggt
aaaaatcctcagacaaaagaagagataattattcctgcatccaacgcacctgtatttaga
gtaggcaaagcgttgagagatgctgtaaacaaatag
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