Clostridium thermosuccinogenes: CDO33_02540
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Entry
CDO33_02540 CDS
T05300
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd03420
Nucleotide excision repair
cthd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDO33_02540
03430 Mismatch repair
CDO33_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_02540
Enzymes [BR:
cthd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDO33_02540
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDO33_02540
MMR (mismatch excision repair)
Other MMR factors
CDO33_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
ResIII
AAA_29
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AUS95416
UniProt:
A0A2K2F7E2
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All DBs
Position
582326..584416
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AA seq
696 aa
AA seq
DB search
MFLSTLKEKYNINLDEQQQQAVKHVNGPALILAGPGSGKTTVITARTAYLILEAGVSPDS
ILTLTFNKAAQLEMEHRFNRIYGADVARKVRFSTLHSFSNRVVMDYEKKQGKRLKRIEGD
EEAGESKRKILSMLYQQINESKLNDDELENLINEIGLVKNKMIKDFEGIKFDTKNFPIIY
KAYEDYKKSNLYIDFDDMLTYAYSILNKCPDILSYYREKYRYIQVDEGQDLSKIQFEILK
LLVKTDDGNIFIVADDDQSIYGFRGADPQYILNIREQFRGCRLYRLENNYRSTKNIVEIS
SNFIKTNTQRFDKNHKTDNDYKYDPNIVQVEDEKEQLKFIVEKLKAHMEEGKSVAVLYRN
NLSSIAIADMLDRSGIPFKVRQNKLFFFNHWVVQDILAFFKFALNQCDGESFSRIYYKMN
RYISKSMLEHALNVDFKESVIDGLLSSGDIKPYQQRVLEELKKEFKMLARKHPLLALEYI
EDNFKYFDSVKEYCENTGLSFDYQYSFFGIMKAIARECLTIPLFLQRMEELRELFEKSKS
SDLKKAATLTTLHSSKGLEYDAVLMVDLTEDEIPGRRAVELAKKNQDNSTLEEERRLFYV
GMTRAKEYLYLVSPSVKNGIRAVRSTFINEVISVMKKKEADEIGEGMIINHKHFGEGVIT
AILEQKGGQVILEIDFGGIRRKLDFSICLENGLITF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaagtacattaaaagagaagtataatataaatcttgatgaacaacagcagcag
gcagttaaacatgttaatgggcctgctcttattttggcagggcctggctcgggcaaaaca
actgtaatcactgccagaactgcataccttattttggaagcgggagtgagccctgatagc
atactcacattgaccttcaacaaagcggcacagttggaaatggagcaccggtttaacagg
atatatggtgctgatgttgcacggaaagtacgattttcaaccttgcacagcttttccaac
cgtgttgtcatggattatgagaaaaagcagggtaaaaggctcaagaggattgaaggggac
gaagaagctggagaaagcaaaagaaaaattctaagcatgctttatcagcagataaacgag
tcaaagctcaatgacgacgaactggaaaatctaatcaacgagatcgggcttgtaaaaaac
aagatgataaaagattttgagggtatcaaattcgataccaaaaacttccccatcatctat
aaagcctatgaggattataaaaagtccaacctatatattgattttgacgacatgctcaca
tacgcttactcaatcctcaacaaatgtcccgatatactttcctattacagggagaagtac
cggtatatccaggtggacgaaggtcaggatttgtctaaaatacagtttgaaatattgaag
ttgttagtgaaaacggatgatggcaatatcttcattgtagcagatgatgaccagtcgatt
tacggcttcaggggggcagatcctcaatatattttgaatattcgggagcagttcagggga
tgccgtttgtatcgcctggaaaataactaccgttctaccaaaaatatagttgagataagc
agcaattttataaagacaaatacccagcggtttgataaaaaccacaaaacggataatgat
tataaatatgaccccaatattgtgcaggttgaggatgaaaaagaacaactgaagtttatt
gtagaaaaactgaaagcacatatggaagaaggcaaaagtgtggcagtcctctatcggaat
aatctttcttccattgcaattgcggatatgttggaccgcagcgggattccgtttaaggta
aggcagaacaagctattcttttttaaccactgggttgtacaggatattcttgcctttttt
aagtttgcgctgaaccagtgtgatggggaatccttttcaagaatctattataaaatgaac
cgttatatatccaaaagcatgctggaacatgcattgaatgtcgatttcaaagaatcagtc
attgatgggcttctcagcagtggtgatataaagccttaccagcaaagagtgctggaagaa
ctgaaaaaagagttcaagatgctggcgaggaaacatcccttgctggcattggaatatatt
gaggataatttcaagtattttgacagtgttaaggaatactgtgaaaacacaggattgtcc
tttgactaccaatacagcttctttggaatcatgaaagctatagccagagaatgcctcacc
atcccgctgtttttacagcgcatggaggagttgcgggagctatttgaaaagtcaaagagt
tcggatttaaaaaaagcggctacgcttacgaccttgcattcatccaaaggtttggagtat
gatgcggtactgatggtggatttaacagaggatgaaattccgggcaggagagcagttgag
ctggcaaaaaagaatcaggataatagcaccctcgaggaggagcgccgtttattctatgta
gggatgaccagggcaaaggaatatctctatctggtgagcccatccgtgaaaaatgggatt
agagcagtaaggtcaaccttcatcaatgaagtcatcagtgttatgaagaaaaaggaagcg
gatgaaatcggagaagggatgatcattaaccataaacattttggagaaggagtaattact
gccatacttgagcaaaaaggcgggcaggttattctggaaattgacttcggaggaataagg
cgaaagctggatttttcaatatgcctggagaatgggctgataactttctaa
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