Clostridium thermosuccinogenes: CDO33_02820
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Entry
CDO33_02820 CDS
T05300
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDO33_02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthd03019
]
CDO33_02820
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_02820
Enzymes [BR:
cthd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDO33_02820
Messenger RNA biogenesis [BR:
cthd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CDO33_02820
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CDO33_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUS95470
UniProt:
A0A2K2EZL9
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All DBs
Position
630871..632223
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AA seq
450 aa
AA seq
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MMNLTEEALKIIMDLGDKNIFVIKTCDFSLYYSILDELKNNTLFYVPNTEIKYRSFKELY
ESTDNLLIDYIYNLRTKSIILLYEQFIQIIEKIDFKIINSSIIVLNNNIERYKFLPINEE
KVINKIATTDINEIQDEEIDYMLEYYDDIRVDRYGDTQRVIIDYKDKNIFENLSVEEINL
VDTTRALSIQRKKYGDYVSDNSVEKCLIYLAQDLKIYINKEYYNRLQSDILLKEFYNSSY
NQVCVIANPEHFDSLPMYLNAWCRIFKNIILVEYDIDTNISYEQTYDIDLLLKKYWNSNK
FREYCIYDIYSNKYQVKKITQKEIIMQILSQYVKSKSGNSNEWKDIFFIASTGAGKSLLY
QLPSIILNDENRITIVVSPLKALMKDQLQTMHEKGLTYATYINSDVSYSEQIERLEGIKN
GKYSLIYVSPEFLQKYSSAKYLVGDRKIGL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacttaactgaagaggctttaaaaataattatggatttgggtgataaaaatata
tttgtcataaaaacttgtgattttagtttatattatagtattctagatgaattaaaaaat
aacacgttattttatgttcccaatacagaaattaaatacaggagttttaaagaactatat
gaaagtacagacaatttgttaatagattatatatataacttaaggacaaagagtattatt
ttgttgtatgaacaatttattcagataattgaaaagattgatttcaaaataattaacagt
agtataatagtgcttaataataatattgaacgctataaatttttgcctataaacgaagaa
aaagttataaataaaattgctactacagatatcaacgaaatccaagatgaagaaatagat
tatatgcttgaatattatgatgatataagagtcgacagatatggtgatacacaaagagtt
attatagattacaaagataaaaatatttttgaaaatttaagtgtagaggaaattaacttg
gtagatacaacccgtgccttatctatacaacgtaaaaaatatggagattatgtgagtgat
aatagtgtagaaaaatgcttaatttatttagcacaggatttaaaaatatatattaataaa
gagtattataacagacttcaaagtgatatattattgaaggaattctataatagttcatat
aatcaagtttgcgtaattgcaaatcctgaacattttgattcgttacctatgtatcttaat
gcatggtgtagaatttttaaaaatattatactagtggaatatgatattgatactaatata
tcttatgaacaaacatatgatattgatttattattaaaaaaatattggaatagtaataaa
ttccgagagtactgtatttatgatatttattcaaataagtatcaagtaaaaaaaattaca
cagaaagaaattataatgcaaattctatcacaatatgtaaaatctaaaagcggcaatagt
aatgaatggaaagatattttttttattgcttcaactggagcaggtaagtcattgctatat
caactaccttcaattattttaaatgatgaaaatagaattactattgtagtttctccttta
aaagcgttaatgaaagaccaattacagactatgcatgaaaaagggttaacttatgctaca
tatataaattcagatgtttcgtattcggaacagatagaaagacttgaaggaataaaaaat
ggaaaatattccttgatatatgtgtctcctgaatttttacaaaagtattccagtgctaaa
tatcttgttggtgatagaaaaataggattatag
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