Clostridium thermosuccinogenes: CDO33_05160
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Entry
CDO33_05160 CDS
T05300
Symbol
nifD
Name
(GenBank) nitrogenase molybdenum-iron protein alpha chain
KO
K02586
nitrogenase molybdenum-iron protein alpha chain [EC:
1.18.6.1
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd00625
Chloroalkane and chloroalkene degradation
cthd00910
Nitrogen metabolism
cthd01100
Metabolic pathways
cthd01120
Microbial metabolism in diverse environments
Module
cthd_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
CDO33_05160 (nifD)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
CDO33_05160 (nifD)
Enzymes [BR:
cthd01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.6 With dinitrogen as acceptor
1.18.6.1 nitrogenase
CDO33_05160 (nifD)
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Motif
Pfam:
Oxidored_nitro
Med28
Gly_rich_SFCGS
CCDC122
Motif
Other DBs
NCBI-ProteinID:
AUS98687
UniProt:
A0A2K2F8T1
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All DBs
Position
1183922..1185535
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AA seq
537 aa
AA seq
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MNKIVDRILFRYPAKVMKNRKEHILVKEPEGPKEISANTRTLPGIITNRGCAYAGCKGVV
IGPIIDMVHITHGPVGCSYYTWAARRNKGKAREGGKSFLEYAFTTDLQESDIVFGGIKKL
AQAIKEAVEIFHPKAISIAATCPVGLIGDDIHAVAKKAQEEYGIPVLAFSCEGYKGVSQS
AGHHIANNKLMKDVVGTEDIPEAQRKKYSVNILGEYNIGGDEWEIKRVLNKIGYTVIATL
TGDAEYGDIAKAHNADLNLVQCHRSINYIADMIEIKYGLPWMKVNFIGIENFSNSLRNMA
KYFGDAELMERTERVIQEEIEDIKDEINRYKEMCKGKTAVLFVGGSRAHHYQGLLKEIGM
ETVMAGYEFGHRDDYEGRDILPYIKLDADTRNIEELTVEKDERKYRLRMSPEKLEELKKE
IPINQYKGMIHDMKDNTIIIDDLNHFETEMFIKALKPAFFGSGIKDKYIVEKMGVYSKQM
HSYDYSGPYAGFRGAVNFARDTAAGIHTPAWSYIVPPWKKEPILKGKIEKEGVEEAC
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagattgttgacaggatattgttcagatacccggctaaggttatgaaaaacagg
aaggagcatattttggtcaaagaaccggaaggcccaaaagagatatctgccaatacaaga
accttgccaggcattataacaaacagaggttgtgcttatgccggctgcaagggtgttgtg
atcgggcccataatcgatatggtgcatattacccacggtccggtgggatgttcctactac
acatgggcagccaggagaaataaaggaaaagccagggaaggcggcaagagttttttagaa
tatgcctttaccaccgacttgcaggagagtgacatagtctttgggggcataaaaaaatta
gcccaggccatcaaggaagcggtggaaatttttcatccgaaagccatatcgatagccgct
acctgccccgtaggcctaataggggatgacatccatgcggtagccaagaaagcccaggag
gaatacggaatacccgttctggccttcagctgcgaggggtataagggtgtaagccagtca
gcaggccaccatatcgccaacaacaaactgatgaaggatgtggtgggaacggaggacata
cccgaagcccaaaggaaaaaatactctgtcaatatattgggcgaatacaacataggtggg
gatgaatgggagataaaaagagtgcttaacaagattggttatacggtaattgcaaccctc
accggagatgcggagtatggcgatatagccaaggcccataatgcggatttgaatctggtg
cagtgccacagatcaataaattatatagccgacatgatagaaataaaatacggattgccg
tggatgaaagtcaatttcatagggatagaaaacttctccaacagccttaggaacatggca
aaatacttcggagatgcagagttgatggaaaggacagaaagggttatccaggaggaaata
gaggatataaaggatgaaatcaaccgctataaggaaatgtgtaaaggaaaaacggcagtt
ttattcgtgggtgggtcaagagcccaccactaccaggggttgcttaaggaaataggcatg
gaaaccgttatggccggttatgaattcggacaccgtgatgattatgagggaagggatatc
ctcccgtatataaagctggatgcggacacaagaaacattgaagaactgacggtggagaag
gacgagaggaaatataggctgaggatgtcgccggagaagctggaagaactgaaaaaggag
atacctataaaccaatacaagggcatgattcatgatatgaaagacaacaccatcatcata
gatgatctgaaccacttcgaaacagaaatgttcatcaaggcattgaaaccggcatttttc
ggctcgggtataaaagataaatacatcgtggagaaaatgggggtttactccaagcaaatg
cattcttatgattactccggaccttacgccggattcaggggagcagtgaattttgcaagg
gatacggctgccggaatccatactccggcatggagctatatagttcctccgtggaagaag
gagcccatattgaaagggaaaattgagaaggaaggagtggaggaagcatgctga
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