Clostridium thermosuccinogenes: CDO33_05400
Help
Entry
CDO33_05400 CDS
T05300
Name
(GenBank) GntR family transcriptional regulator
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
cthd
Clostridium thermosuccinogenes
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cthd03000
]
CDO33_05400
Transcription factors [BR:
cthd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CDO33_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
GntR
Peripla_BP_3
HTH_41
ANF_receptor
HTH_DeoR
HVO_A0261_N
TrmB
Fe_dep_repress
Rrf2
Asparaginase_C
LexA_DNA_bind
Peptidase_M74
Motif
Other DBs
NCBI-ProteinID:
AUS95925
UniProt:
A0A2K2F3J4
LinkDB
All DBs
Position
1250744..1251898
Genome browser
AA seq
384 aa
AA seq
DB search
MKKGSLSLYKSIYNDLEKKILSGQYKVGDRIPSEKELSEEYKVSRITSKKALEMLAEKGL
IDRAPGRGSFVKSNSTDETDNECLKDPKNEEDKVARPPMIGVILPDFAESYGTSLLSGIE
KEASEKNCFIVLKRSYGRQDIEENVIDSLLELGVDGIIIMPVHGELYNREILRLTLDGFP
IVSVDRCLSGIPVPFVGTDNISASAKITDYVLKLGHKNIAILSPPYKNTSTIEDRIEGFI
KSHAEHGVGIDDSLWLTDLISTLPEKDAKENRQRDIDKIVKLLKENPQITCMYAMEYNIA
LLAMKAAKSLGKAIPKDLSIVCFDSPFNYADEYLFTFIQQKESEMGETALRLLLNLMKKK
GDVEKVYLDADLVIGTTTGKARSV
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagggtagtctgtcgctatacaaaagcatttataatgatttggagaaaaaaatc
ctgtccggacaatacaaggtaggagacaggattccgtcggaaaaggaattatcggaagag
tataaagtgagccggattaccagcaaaaaagcattggagatgctggctgaaaaaggactg
attgacagggcccccggtagaggatcttttgtaaagagcaattcgacggatgaaacagat
aatgagtgtctgaaagatcctaaaaatgaggaagacaaagttgcccgccctcctatgatt
ggtgtgattctgcctgattttgccgagtcttatggtacatccctgctttcgggtattgaa
aaggaagcctccgaaaagaattgcttcatcgtgctaaaacgttcctatggaagacaggac
atagaagagaacgtgattgactccctgctggaattgggagttgatggcatcataatcatg
cctgtccatggagaactgtataaccgcgaaattttgcggctgaccctggatggctttcca
attgtctcggtggatagatgtttgagtgggataccggttccgtttgtaggtaccgataat
atcagcgcttcagcaaaaataactgattatgtcctcaaacttgggcataaaaacatcgcc
atcctctcgcctccgtataaaaatacctcaacaatcgaagacaggatagagggttttatt
aaaagccatgcggagcatggggtggggatagatgattcgttgtggctgaccgacctgatc
agcacattgcctgaaaaggatgcgaaagagaacaggcaaagggatatagataaaatagtt
aaactcctgaaggaaaatccccagatcacatgcatgtatgccatggaatacaatatcgca
ctgctggctatgaaggctgcaaaatccttgggaaaggccatcccgaaggatttatccatt
gtatgctttgacagcccattcaattatgcggacgagtatttatttacctttatccagcag
aaggaatctgaaatgggagaaacagccctgagactgcttttgaacctgatgaagaaaaag
ggagatgtggaaaaggtatatctggatgcagatctggttataggcactacgacaggcaaa
gccagatccgtatag
DBGET
integrated database retrieval system
