Clostridium thermosuccinogenes: CDO33_05950
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Entry
CDO33_05950 CDS
T05300
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd03030
DNA replication
cthd03430
Mismatch repair
cthd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDO33_05950 (polC)
03430 Mismatch repair
CDO33_05950 (polC)
03440 Homologous recombination
CDO33_05950 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cthd03032
]
CDO33_05950 (polC)
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_05950 (polC)
Enzymes [BR:
cthd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDO33_05950 (polC)
DNA replication proteins [BR:
cthd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDO33_05950 (polC)
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDO33_05950 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
DNA_pol3_a_NI
tRNA_anti-codon
RNase_H_2
DEDDh_C
HHH_3
POT1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AUS96020
UniProt:
A0A2K2FKV0
LinkDB
All DBs
Position
1384667..1388989
Genome browser
AA seq
1440 aa
AA seq
DB search
MQNVATSNGKLLDLFPEIRLEEDVYNLLANLSIQNINVYRKSRKLEIFTLSRELIPAEVI
LNLERNLEKSFNLESVGIKVKYDLDMSPEKKLELYQDSIIHMASKEVAMCRGILAGSRWE
LADKKLMIRLGTKGENILKSKACDSLIERIIEECFSFKVKVEFIDCEMDEQLKEEYIRQK
SDVEAKIISKVITGASVAENKPEYKVSQNGRKDEQQEGKSSDVILGKNFSDSIIKMSEVT
QDSGKVSVCGEIFRVEFKEIRGERYICTFDITDKTNSLTAKFFIKKNDYDLMKELVKEGT
YVKLRGEVQYDKFAREIVIMASDIVEEKKPVRIDDAEVKRVELHLHTQMSAMDGVTSAAD
LVKRAAKWGHKAIAITDHGVVQAYPDAYSTAKKENIKIIYGVEAYLLDDRIPVVYNPKDQ
CLDDSFVVFDIETTGLDAEKDKITEIGAVKIKGGKIVDRFSTFVNPEVPIPAHITKLTGI
TDEMVKDAPVISAALDEFLRFSEGSVLVAHNANFDVGFIRHNCRVLGKDATFTVLDTLQL
CRNLFPELGRHKLNIVAKHLGVSLENHHRAVDDSKATADILLICFDKLKERGIHAISEID
TAFEGNYDFTKAASYHAVILVKNTVGLKNLYKLISRSHLEYFHKKPRVPRKLFMEYREGL
IIGSACEAGELYTAIVNKKSEEEVERIASFYDYLEIQPLGNNRFLVDSGKVESEEELKNI
NRRIVALGEKLNKPVVATCDVHFMDPEDEVFRRILMAGQGFADADNQAPLYFRTTKEMLS
EFDYLGPEKAYEVVVTNTNLIADMIENVPPVLPGTHPPRIDGAEEEIKNLAESRARELYG
DPLPQIVKERLDKELNSIIKNGFAVMYLIAQKLVHKSLSDGYLVGSRGSVGSSFVANMTG
ITEVNSLQPHYLCENCKHSEFITDGSVDCGFDLPDKNCPVCGTKMKKDGYDIPFETFLGF
DGDKEPDIDLNFSGEYQPVIHKYTEVLFGEGHVFRAGTIGSVAEKTAFGFVKNYLEERGK
VVTNAEINRLVKGCTGVKRTTGQHPGGIMIVPKDKEIYDFSPIQHPADDTQSDTITTHFD
YNFLHGSILKLDILGHTVPTTIRMLQDLTGVEPTKIPLDDEKTMQLFNSTEPLGVTPEEI
GSPVGTFGIPEFGTGFAIGMLVDTKPKAFSDLIRLSGLSHGTDVWRGNAQDLIKNNIATL
SECICCRDDIMLYLKYNGVPPKTAFKIMEDVRKGKGLKEEYEQVMRENNIPEWYIESCKK
IKYMFPKAHAAAYVMMAFRIAWFKVYYPEAFYATYFTVSVDDFDADIMTRGQDKVRNKLK
ELERKLKENTISPKEKSMITMLEIVNEMYARGIKLLPVDLYKSDAVKFQVTENGIRPPFI
ALQGLGEAAARSIAEARAQGEFLSIDDLKIRGKVGKGVLEILQNHGCLEGLPESNQLSFF
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaacgtagcaacaagcaatggaaagctgttggacttgtttcctgaaatcaggctg
gaagaggatgtttacaaccttctggccaatctttcgatacagaatataaatgtttacaga
aaatccagaaagcttgagatattcactttatcaagggaattaattccggcagaagtcata
ctgaatctggaacgaaatctggaaaaaagctttaatctggaatcggtgggaataaaggtc
aaatatgatttggatatgtctccggagaaaaaactggagctgtatcaggacagtataata
catatggccagcaaagaggtggccatgtgccgcggaattctcgcaggcagcagatgggag
cttgcggacaaaaagctgatgatccggctaggcacaaaaggagaaaacatattgaagtcc
aaggcctgcgacagcctgatcgagagaatcatcgaggagtgcttttcttttaaggttaag
gtagaatttattgattgtgagatggatgaacagttgaaagaagaatatatcaggcaaaaa
tctgatgtggaagccaaaattatcagcaaagtcataaccggagcatctgttgctgagaac
aagccggagtacaaggtttcacaaaatggacggaaggatgaacagcaggaaggaaaaagc
tctgatgtgattttgggtaagaatttcagcgacagcattattaaaatgtcggaggtgacc
caggactcggggaaggtatccgtatgcggcgaaattttcagggtcgagttcaaggaaata
cggggagaacgttatatatgcacttttgatatcaccgataaaaccaattcccttactgca
aagttttttatcaaaaagaatgattatgaccttatgaaggagctggtgaaggaagggacc
tatgtaaaactccgcggagaggtgcagtatgacaagtttgcgcgggagatcgtgataatg
gcttccgatatagtggaggaaaagaagccggtaagaatagatgatgcggaagtcaagagg
gtggagcttcaccttcacacgcagatgagtgcgatggatggagttacatcggcagccgat
ctggtgaagagggcggcaaaatggggccacaaggctattgccattaccgaccacggagtg
gtgcaggcctatcccgatgcctacagcacagcaaaaaaggaaaatataaaaatcatatat
ggagttgaggcataccttttggatgacaggatacctgtggtatacaatcctaaggatcaa
tgcctggacgactcctttgtggtttttgacattgaaaccaccggccttgatgcggaaaaa
gacaagataacggagataggagccgtaaaaataaagggaggaaagatagtcgacaggttc
agcacctttgtaaacccggaagttccgataccggcccatataacaaagctcaccggaata
actgatgagatggtaaaggatgctccggtgataagcgctgctttggatgaatttctgcgc
ttctcggagggcagcgtgctggttgcccacaatgccaattttgatgtggggttcatcagg
cacaattgccgggtgctggggaaggatgccacatttaccgttttggacacccttcagctt
tgcagaaacctgtttccggagctgggaaggcacaagctcaatattgtggcaaaacatctg
ggagtgtccctggaaaaccatcaccgtgccgtagacgattcaaaagcgacggccgatatc
cttcttatttgctttgataagctgaaggagagaggtatacatgctataagcgagatagat
acagcttttgagggcaactacgatttcacaaaggctgcatcctaccatgccgtaatactg
gtcaaaaatacggtgggtttgaagaacctttacaagctgatatcccggtcccatctggaa
tatttccataaaaagcccagggttcccagaaagctttttatggaatacagggaaggactg
ataatcggttctgcctgtgaagcaggagagctttacacggcaatcgttaacaaaaaatcg
gaagaggaagtggagcgcatagcttccttctatgactatcttgagatacagcccttgggg
aacaaccgattcctggtggacagcggaaaggtggaaagtgaagaggaactgaaaaatata
aacagaaggatagtggcgttgggtgaaaagcttaataagccggtggtggccacctgcgac
gtccatttcatggatccggaggatgaggttttccggcgcatactcatggcggggcagggg
tttgccgacgccgacaatcaagcgcctttatatttcagaacaacaaaggaaatgctgtcc
gagtttgattatttgggacctgaaaaagcttatgaggtggtggttaccaatacaaacctg
atagccgatatgatagaaaacgttccccctgttctcccgggaacccatcctcccagaata
gatggtgccgaggaggaaataaaaaacttagccgaaagcagagcccgggagctctatggt
gatccgctgccccagatagtaaaagaacgtcttgacaaggaacttaactctatcattaaa
aatggttttgcagttatgtacctcatcgcccagaagctggtgcacaagtctttgagcgat
ggctatctggtaggatcgaggggatcggtaggttcctcttttgtagccaatatgacaggg
ataacggaggttaactccctgcaaccccattatctttgtgaaaactgcaagcattcggaa
tttatcaccgacggtagcgttgactgcggatttgacctgccggataagaactgtccggta
tgcggcaccaaaatgaaaaaggacggttacgatatccccttcgaaacattccttggcttt
gacggcgacaaggaaccggatattgacctgaacttctccggtgaatatcagcctgtcatc
cataaatataccgaggttttgttcggggaaggccatgttttcagagccggaaccatcggc
tccgttgcggagaaaacagccttcgggtttgttaagaactacctcgaggaaaggggcaag
gttgttactaatgcggagataaacaggttggtcaaggggtgtaccggggtgaagagaacc
acgggacagcatccgggaggtataatgattgtgcccaaggataaggagatatatgatttt
tctcccatacagcatcctgcggatgacacccaatcagataccataaccacccactttgat
tacaacttcctgcatggcagtatactaaagctggatatactgggtcatacggtgccgaca
accatacgcatgctgcaggaccttacgggggttgagcctacaaaaatacctttggatgat
gagaaaaccatgcagctcttcaacagcaccgagccactgggggttaccccggaggagata
ggaagcccggtggggactttcggcatccctgaatttggtacaggctttgccatcggaatg
ctggtggatacaaaacctaaagccttttccgaccttataaggctgtcggggctttcccat
ggtaccgacgtatggcgcggcaatgctcaggatctgataaagaacaatattgcgaccctt
tcggaatgtatatgctgccgcgatgatataatgctgtaccttaaatataatggagtccct
cccaaaactgcgtttaagataatggaagatgtccgtaagggtaaagggctgaaggaagaa
tatgaacaggttatgagggagaacaatatacccgaatggtatatcgaatcctgcaaaaaa
ataaaatacatgtttccgaaggcgcatgctgctgcatatgtcatgatggctttcagaatt
gcatggttcaaggtgtattatcctgaagccttttatgcgacatattttaccgtgtctgtc
gacgattttgatgctgatataatgacccgtggacaggataaggtcaggaacaagcttaag
gagttggaaagaaagctgaaggaaaacaccatatcgcccaaggaaaaaagcatgataaca
atgctggaaatagtaaatgagatgtacgccagaggtataaagctgctgcccgtagacctg
tacaaatccgatgcagtcaaattccaggtgacggaaaacggcataagacctccctttata
gccctccagggcttgggagaggcagcggcgcgaagcatagccgaagcccgcgcccagggt
gagtttttgtcaatagatgaccttaagataaggggcaaagtgggtaaaggagtgctggag
atactgcagaaccacggatgcctggaagggttgccggaaagcaaccagttgagtttcttt
tag
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integrated database retrieval system
