Clostridium thermosuccinogenes: CDO33_05990
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Entry
CDO33_05990 CDS
T05300
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cthd
Clostridium thermosuccinogenes
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthd03016
]
CDO33_05990
Enzymes [BR:
cthd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDO33_05990
Transfer RNA biogenesis [BR:
cthd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDO33_05990
Prokaryotic type
CDO33_05990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Nro1_C
Motif
Other DBs
NCBI-ProteinID:
AUS98705
UniProt:
A0A2K2FL02
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All DBs
Position
1396320..1397213
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AA seq
297 aa
AA seq
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MNGILNVMKPPGMTSFDVVASLRRILKTKKIGHTGTLDPGAVGVLPVCVGSATKAIEFMT
EKDKLYRAELKLGITTDTQDITGQVTDTRKVNVTREQVLDAIMSFVGTYSQVPPMYSAVK
INGQKLYELARSGKTIEREPRVVNIYYINVIDISEEDGSVLFDVACSKGTYIRTLCADIG
EKLGCGGCMSFLIRLKSGPFDLESSLTLDEIEELYSADRLKEKMFHVDRVFADLDEVVLK
EAEIRKIINGAAVRMFKGMKPGVQLRIYDQDHRFVALGITEKYEDSILLRSRKLFLA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggcatactaaacgttatgaaaccccccggcatgacttccttcgatgttgtagca
agccttcgccgcatcctgaagacaaaaaaaatcggccatacggggactcttgaccccgga
gccgtgggggtgctgcctgtgtgtgtaggcagtgcaacaaaggccatagagtttatgaca
gaaaaggacaagctataccgtgcagaactgaaactgggcataaccaccgatacccaggac
attaccggtcaggttacggataccaggaaggttaatgtaaccagggaacaggtgctggat
gcaatcatgagctttgtgggcacttacagccaggtgcctcctatgtattccgccgtaaaa
ataaacgggcaaaagctttatgagcttgccagaagcggaaagacgatagagagggagccc
agggttgtcaatatatactatataaatgtaattgacatatcggaggaagatggcagcgtc
ctttttgatgtggcctgttccaaaggcacgtatataaggactctttgcgcggatatcggg
gaaaagctgggatgcggaggctgcatgtcctttcttatcaggctgaaatccgggcctttt
gacctggagtcatcccttaccctggatgaaattgaagagctttattcggcagacaggctg
aaggagaagatgtttcatgtggacagagtatttgccgacctggatgaggtggtgctgaaa
gaagctgaaataaggaaaatcataaatggcgcagctgtaaggatgtttaaaggtatgaag
cccggtgtgcagcttaggatatatgatcaggaccataggtttgtcgcattgggtataacg
gaaaaatacgaagactctattctattgagatcaagaaaactatttcttgcgtga
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