KEGG   Clostridium thermosuccinogenes: CDO33_06590
Entry
CDO33_06590       CDS       T05300                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cthd  Clostridium thermosuccinogenes
Pathway
cthd03030  DNA replication
cthd03410  Base excision repair
cthd03420  Nucleotide excision repair
cthd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cthd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CDO33_06590
   03410 Base excision repair
    CDO33_06590
   03420 Nucleotide excision repair
    CDO33_06590
   03440 Homologous recombination
    CDO33_06590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cthd03032]
    CDO33_06590
   03400 DNA repair and recombination proteins [BR:cthd03400]
    CDO33_06590
Enzymes [BR:cthd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CDO33_06590
DNA replication proteins [BR:cthd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CDO33_06590
DNA repair and recombination proteins [BR:cthd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CDO33_06590
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CDO33_06590
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_2 HHH_5
Other DBs
NCBI-ProteinID: AUS98715
UniProt: A0A2K2FPT5
LinkDB
Position
1535921..1538620
AA seq 899 aa
MNKEKLMIIDGNSILNRAFYGLQGKQLLSTSDGLYTNAVYGFLNILHKYVEEEKPQYLCV
AFDLKAPTFRHKEFEGYKANRKGMPPELAVQLPVIKEVLDAMNIKRLECEGYEADDIIGS
VSLCAEKQGMDVIIITGDRDSLQLATETTRIKIPTTRGGKTETDEYDKNRVMEKYGVTPL
EFIDVKGLMGDTSDNIPGVPGIGEKTAISLIKEFGSIENLYENLDKIDKKSVREKLAANR
EQAFLSKRLATIDRHMSELCSIEDLKRNDFNKEKLYELFKRLEFKSFIDKFGLDEVQSSA
HSTLQTVKVECLESSEGLKKLKEDIASQGKFGFYCLIDKIDNFDNKLVGIGFSLGEKSGT
YVNLNGCVDEDEFLKEFKDVFENGDIKKYGHDVKNFIVYLKNKGISLEGLAFDTMIGAYL
INSTRATYTVSELAREYLGFEIKPIEELSGKGKNFVAFGDMQEDVISQAACDHACAVMGI
ARALDEKLKEYDQESLYYDIELPLIKVLASMEYWGFKVNVEELKKFSEELEGKIELLTRE
IYSIAGEEFNINSTKQLGTILFEKLQLPVIKKTKTGYSTDAEVLEELSDRHEIIRKILDY
RQLVKLQSTYAEGLQHVINPRTGKIHSSFNQTVTATGRISSTEPNLQNIPIKLEMGRKIR
KVFVPSSSEFMLLDADYSQIELRVLAHITNDQNMIAAFNNNEDIHTTTASQVFGVPMEEV
TPLMRSRAKAVNFGIVYGIGDFSLAKDLGITRKEARRYIDSYLDKYPGVKQYMHDIVEFG
KQNGYVATLFHRRRYLPELQSKNHNIRSFGERVAMNTPIQGSAADIIKIAMVKVYEELQK
RNLRSRLILQVHDELIIEMHVDEKEEVTKLLKDSMENAVKLRVALNVDINSGNSWYDTK
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgaacaaggaaaaattgatgataatcgatggaaacagcattttaaacagagctttttac
ggacttcagggaaaacaacttctttccacctccgatggcttgtataccaatgctgtttac
ggttttttgaacatacttcataaatatgtagaagaagaaaagccccagtacttatgtgtt
gcttttgacttaaaagcgccaaccttcaggcacaaagagtttgagggatataaggccaac
agaaagggaatgccgcctgaactggctgtccagcttccggtcataaaggaagttctggat
gccatgaacataaaaagacttgaatgtgaaggttatgaagcggatgatatcatcggatcg
gtttccctgtgtgcagaaaaacagggaatggatgtgatcatcattacgggggacagggac
tccttacagctggcaacggagaccaccagaataaaaatacccaccacccggggcggtaaa
accgagacggatgaatatgacaaaaacagggttatggagaagtatggagtcactccgttg
gagtttatcgatgtaaagggtctgatgggagatacttccgataatatccccggagttccg
ggaataggggagaagacagctataagccttataaaggagtttggcagtattgagaacctg
tatgaaaacctggataagatagataaaaaaagcgtgcgggagaagctggctgccaacagg
gaacaggctttcttaagcaaaaggcttgccaccatagacaggcatatgagcgagttgtgc
agcatcgaggatttaaaaaggaacgatttcaacaaagaaaagctctatgagctgtttaag
cgcttggaattcaagagctttatagataagttcgggcttgacgaggtccaaagcagtgca
cattcgacgctgcaaacggtaaaggtggaatgcctggagagttccgaaggactgaaaaag
ctcaaggaagatattgcttcacaaggcaaattcgggttttattgccttattgataaaatt
gacaactttgacaacaaactggtgggaataggcttttcccttggtgaaaaatcaggaact
tatgtaaatcttaacgggtgcgttgacgaggatgagtttttaaaagagttcaaagatgtt
tttgaaaatggagacattaaaaagtatggtcatgatgttaagaatttcatagtatatttg
aaaaataagggcatatcgctggaaggactggcctttgataccatgataggcgcttacctc
atcaactcgacaagggccacatatactgtatcggagctggcgagggagtacctgggtttt
gagatcaaacccattgaggaattatccggaaagggaaaaaatttcgtagcctttggtgat
atgcaggaggatgttatttcccaggcagcgtgtgatcatgcctgtgcagttatgggcatc
gccagggctttggatgaaaagctgaaggaatatgatcaggaaagcctttattatgacata
gagctgcctttgataaaggttcttgcctccatggaatactggggctttaaagtgaacgtg
gaggaactgaaaaagttctcggaggagcttgaagggaagattgagcttctgacccgggaa
atatacagcattgccggagaagaattcaacataaattctacaaagcagctggggacaatt
ttatttgagaagctgcagctcccggtgatcaagaaaaccaagacaggatattccaccgat
gcggaggtccttgaggagctttccgaccgccatgaaataataagaaaaatattggattac
aggcagttggtgaagctgcaatccacatatgcagaaggcttgcagcatgtgattaacccc
agaacgggcaagatacactccagctttaaccagacagtcacagctaccgggaggataagc
agtactgagcctaatcttcagaatatacccatcaagctggagatgggtagaaagatccga
aaggtttttgtgcccagcagcagtgaattcatgcttctggatgccgactattcccagatt
gaactcagggttctcgcccatattaccaatgaccagaacatgattgcggcattcaacaac
aatgaagatatccatactaccaccgcatcccaggtttttggagtgcctatggaggaggtt
acacctctgatgagaagcagggcaaaggccgtaaacttcggcatagtgtatggaatcgga
gatttcagtctggcaaaggatctgggaataacaagaaaggaagcccgccggtatatagac
agctatttggacaaatatcccggggttaagcagtatatgcatgatatcgtggagtttggc
aagcaaaacggatatgtggctaccctgttccaccgaagaaggtatctgccggaattgcaa
tccaaaaaccacaatatacgatcctttggggaacgtgtagccatgaacactcctatacag
ggaagtgcggcggacatcatcaagattgccatggtgaaagtatacgaagaactgcaaaaa
aggaacttgagatcgagactgatactgcaggtgcatgatgaattgatcatagaaatgcat
gtggatgaaaaggaagaagtgacaaaacttctcaaggacagcatggaaaatgcggtaaaa
ctccgggtggctttaaatgtagacattaacagcggaaacagctggtatgatacaaaatga

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