Clostridium thermosuccinogenes: CDO33_07005
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Entry
CDO33_07005 CDS
T05300
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDO33_07005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthd03019
]
CDO33_07005
03016 Transfer RNA biogenesis [BR:
cthd03016
]
CDO33_07005
Enzymes [BR:
cthd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDO33_07005
Messenger RNA biogenesis [BR:
cthd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDO33_07005
Transfer RNA biogenesis [BR:
cthd03016
]
Prokaryotic type
tRNA degradation factors
CDO33_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
S1_RRP5
KH_2
Dynamin_M
Microp_apicomplexa_15
DnaT_2
Motif
Other DBs
NCBI-ProteinID:
AUS96207
UniProt:
A0A2K2FCA7
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All DBs
Position
1622645..1624753
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AA seq
702 aa
AA seq
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MQKFSMELAGRTLTIEIGKMAQLANGSVLVRYGDTAILSTATASATPREGIDFFPLSVDY
EERLYSVGKIPGGFIKREGKPSEKAILTSRVIDRPIRPLFPKDLRNDVVIVNTVLSVDQD
NSPEIAAMIGTSAAISISDIPWNGPIGGVVLGLVDGEVVINPNTAQREKSQMYVTLAGTK
DKITMIEAGANEVPDDVMLNAVKRGHEDIKRIVEFIEGIRKEVGKPKFEYTSYEVPEEIF
AAVKEFAYEKMREAVLAVDKQDRDAKIEKLTQEIQEHLAESFPEMETQINEAIYKLEKKV
VREYILEEDKRVDGRRLDEIRPLSAEVALLPRAHGSAMFQRGQTQVLTVATLGALGDVQI
LDGIDLEESKRYMHHYNFPGYSVGEAKTSRGPGRREIGHGALAERALEPVIPSQEEFPYA
IRLVSEVLMSNGSTSQGSVCGSTLALMDAGVPIKSPVAGISAGLVIDENNPERFKTFMDI
QGIEDFFGDMDFKVAGTKKGITAIQVDIKVEGLTYEIIEQAFELTRKGREYIIDNVILKT
IEKPRKELSPYAPKILTTIIDPDKIRDVIGPGGKMINKIIQETGVKIDIEDDGKVFVSCV
DIKAGKRAIQIIDGIAKDVEPGQIYMGKVMRITTFGAFVEILPGKEGLVHISKLDKKRVA
KVEDVVNVGDEILVKVIDIDKQGRINLSRKDAMSEEEERKEN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattcagtatggaattggcaggaagaacattaacgattgaaatcggaaaaatg
gctcaactggcaaatggatctgttttagtaagatatggtgatacagctatactttcaact
gccactgcatccgctacaccgcgggaagggatagacttcttccctttgagcgtggattat
gaggaaagactgtactcagtaggtaagattcccggtggttttatcaagagggaaggaaaa
ccgtcggaaaaggcaatattgacttcgagggttatagacaggcctattaggcctttattt
cccaaagacctcagaaatgatgttgtcatagtaaatacggttttatcggtggatcaggat
aactcaccggaaattgccgccatgataggtacctcagctgcaataagcatatccgatata
ccatggaatggtcctataggtggagtagtgctgggactggtggatggcgaagtggtaata
aacccgaataccgcccagagggaaaagagtcagatgtatgtgactcttgccggcaccaag
gacaagataacgatgatagaagccggagccaacgaagtgccggatgatgtgatgctgaat
gcggtcaagagaggacatgaagacattaaacggatagttgagtttattgagggaatcagg
aaagaagtaggaaagcctaagtttgagtatacctcttatgaggttccggaagaaatattt
gctgctgtcaaagagtttgcatatgagaaaatgagagaagctgttttggcagtggacaag
caggaccgggatgcaaaaatcgaaaagctgactcaggaaatccaggagcatcttgctgag
tcctttccggaaatggagacccagataaatgaagctatatacaagctggaaaagaaggtt
gtaagagaatatatcttagaagaagacaagagggttgacggaagaaggctggatgaaatc
aggccgctttcagcagaggttgcactgctgccaagggcgcacggctcagccatgttccag
cgtggacagacccaagtgcttaccgtagccactcttggagctcttggtgatgttcagata
ttggatggtatagatcttgaggaatcaaaaaggtatatgcatcattacaacttccccggt
tatagcgtgggagaagcaaagacctcaagaggtcccggaagaagagaaataggccatgga
gctctggctgaaagagcccttgagccggtgattcccagccaggaggaatttccttatgcc
atcaggctggtatccgaagtgctgatgtccaatggttctacttcccagggtagtgtttgt
ggaagcaccctggctcttatggacgccggagtaccgataaagagtccggtagcaggtatt
tctgccggccttgtcatagatgagaataatccggaaagattcaaaaccttcatggatatt
cagggaattgaggacttcttcggagatatggattttaaggttgcaggaacaaagaaaggt
ataacagcaatacaggtggatatcaaagtagaaggtctgacatacgaaataatagagcaa
gcttttgaattgacccgcaaaggtcgtgagtatattattgacaatgtcatactgaaaact
attgagaaacccagaaaagaactttcaccctatgctccgaagatactgacaaccatcatt
gaccctgataagataagggatgtaatcggtcccggcggaaaaatgataaacaagataatt
caggaaaccggggtaaaaattgatatagaagacgatggaaaggtatttgtatcctgtgtt
gatatcaaggcaggcaagagggccattcagataattgatggtattgccaaggatgttgag
cctggtcagatttatatgggcaaagtaatgaggataacaaccttcggagcttttgtcgaa
attctgcctggcaaggaaggcctggttcatatttccaaacttgataaaaagcgggttgca
aaagttgaagatgtggtcaatgtaggtgacgagattcttgtaaaggttattgatatagat
aagcagggaagaataaacctttcaagaaaagatgctatgtctgaggaagaggagaggaaa
gaaaactaa
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