Clostridium thermosuccinogenes: CDO33_07495
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Entry
CDO33_07495 CDS
T05300
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CDO33_07495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthd03021
]
CDO33_07495
Transcription machinery [BR:
cthd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDO33_07495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
AUS96289
UniProt:
A0A2K2FI99
LinkDB
All DBs
Position
1724105..1725184
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AA seq
359 aa
AA seq
DB search
MKMTNENRKAVLKDLIQRGKAKGMLTYKEIMDAFEEIEIEPEQIEKVYETVENMGIDVVG
DIESEMEDIQLTEEDLDLSIPEGISIDDPVRMYLKEIGKVPLLSAEEEIELAKRMEKGDK
EAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYEKGFKFSTYATW
WIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPMPEEIAKEMNMSVDK
VREIMKISQEPVSLETPIGEEEDSHLGDFIPDDDAQAPAEAAAFTLLKEQLIDVLDTLTP
REEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaccaatgagaacagaaaagcagtgcttaaggatctgatacaaagaggcaag
gcaaagggcatgctgacatataaagaaataatggatgcctttgaagagatagagattgag
ccggagcagatcgaaaaagtttatgagacagtggaaaatatgggaattgacgttgtaggg
gacatagagtctgaaatggaggatatacagcttacagaggaggatctcgacttatctatc
cccgaaggcataagcattgatgaccctgtccgtatgtatttgaaggaaataggaaaagta
cctctgctttcggctgaggaagaaatagaactggcaaaaagaatggaaaaaggagataag
gaagccaagaagaggctcgcagaagcgaatctcaggcttgttgtcagcatagccaaaaga
tatgtaggtagaggcatgctttttcttgatttgatccaggaaggaaatttaggtttaatc
aaagctgtagaaaagtttgattatgaaaaaggatttaaattcagtacttatgctacatgg
tggatcaggcaggcaatcacaagggcaatagcagatcaggcccgtacaattaggatacct
gttcacatggtagaaacaataaacaagctcataagggtttcaaggcagctccttcaggaa
ctgggaagagaacctatgcctgaagaaattgcaaaggaaatgaatatgtctgttgataag
gtaagggagataatgaaaatatcccaggaacctgtttcccttgaaactcctataggtgaa
gaggaagacagccatctgggcgattttatacccgatgatgacgcccaggcaccagcggaa
gcagcggcttttaccctgcttaaggagcagctgatagatgttctcgataccttgacaccc
cgggaggaaaaggttttgaggctgagattcggcttggatgacggccgggccagaaccttg
gaagaagtgggtaaggagtttaatgttaccagagagagaataaggcagatagaagccaaa
gctttaagaaagctgaggcatcccagcagaagtaaaaaattaaaggattatcttgattaa
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