Clostridium thermosuccinogenes: CDO33_07670
Help
Entry
CDO33_07670 CDS
T05300
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cthd
Clostridium thermosuccinogenes
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cthd03032
]
CDO33_07670
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_07670
Enzymes [BR:
cthd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CDO33_07670
DNA replication proteins [BR:
cthd03032
]
Prokaryotic type
DNA Topoisomerases
CDO33_07670
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDO33_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DNA_ligase_ZBD
HypA
A2L_zn_ribbon
Toprim_4
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AUS96319
UniProt:
A0A2K2FPC3
LinkDB
All DBs
Position
1761998..1764097
Genome browser
AA seq
699 aa
AA seq
DB search
MADYLVIVESPAKAKTIGRFLGKDYKIEASVGHVRDLPKSQMGVDIEHDFEPKYITIRGK
GDVINKLKKEAKNAKKVYLASDPDREGEAISWHLSKLLNIDEKEKCRITFNEITKNAVKN
AIKSPRQIDMNLVDAQQARRVLDRVVGYKISPLLWRKVRKGLSAGRVQSVATRLICDREE
EIERFVPEEYWTIMAKLLQTSTKSTFDAKFYGTAGEKMELKNEEQVKKILEELKSSKFVV
KKIKTSEKKRSPAPPFTTSTLQQEASRKLGFATKKTMMLAQQLYEGVEIKGTGAVGLVTY
IRTDSTRVSAEAQQEAINYIREKYGNEYLPGEARVYKNKSAAQDAHEAIRPTYMSMQPDA
IKDSLSKDQYKLYKLIWDRFIASQMASAVYDTVSVDISAGDYIFKANGSKVKFPGFMVLY
IEGRDDETEDAEMNIPELKEGEEVSLKKMEHKQHFTQPPPRYTEATLVKALEEKGIGRPS
TYAPTITTILARGYVEKEKKFLVPTELGKIVTDIMKNHFKDIVDVQFTAQLEDKLDSVET
GEKKWVDVMKEFYGPFEKVLKEAESQIGEVNIPDEVTDIKCEKCGRNMVIKNGRYGKFLA
CPGFPECRNARPILEEAGVNCPKCGGKVMIKKTRKGKKYLGCENNPNCDFMTWNMPAGEN
CPECGNFLEKKYSGKKVVLKCSNEKCGFEKQEEKSEKED
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttggtaatagtcgagtccccggcaaaggcgaaaacaataggcaggttt
ttgggaaaggattataaaatagaagcatctgtcggacatgtcagagatttgcccaaaagc
caaatgggagtagacatagaacatgactttgaaccgaaatatataaccatcaggggtaaa
ggcgatgtaattaataagctcaagaaagaagcaaaaaatgcaaaaaaggtttatctggca
tcggaccctgatcgcgagggagaagcaatttcgtggcatctttcaaagctgcttaatata
gatgaaaaggaaaaatgcagaataactttcaatgaaattaccaagaatgctgtaaaaaat
gctataaaatcaccccggcaaatcgatatgaatcttgtcgatgcacagcaagcgcggcga
gtgctggacagggtagtcggatataaaataagcccgcttctctggcgtaaggtcagaaaa
ggtctgagtgccggaagagttcaatccgttgctaccaggctgatatgtgacagggaggaa
gagattgagagatttgttccggaagagtattggacaatcatggcaaaactgctccaaaca
tcaacaaaatcaacttttgatgctaagttctacggcactgccggagaaaaaatggagctg
aaaaacgaggaacaggtaaagaaaatactggaagaactgaagtcaagtaaatttgttgtc
aagaagatcaaaacatccgaaaagaaaagatcacctgcacctccgtttaccaccagcacc
ctgcagcaggaagcctccagaaagctcgggttcgcaacaaagaagacaatgatgctcgcc
cagcagctatatgagggagttgagataaaaggcaccggagcggtcggcttggtaacctat
atccgtactgactcaacaagggtatctgcagaagcccagcaggaggccataaattatata
agggagaaatacggaaacgaatatctgcctggagaagcaagggtttataaaaacaaatcc
gcagcccaggatgcccatgaagctatccggccgacctatatgtccatgcagccggatgct
atcaaggattcgttgtccaaagaccagtacaagctttataagcttatttgggacaggttt
attgcaagccagatggcatcggccgtatatgacaccgtatcagtggatataagtgcagga
gactatatatttaaagccaacgggtctaaagtgaaattccccgggtttatggtcctatat
atagagggcagggatgacgaaaccgaagatgcggagatgaacattcctgagctcaaggaa
ggcgaggaagtctccttgaaaaaaatggagcataaacagcactttacccagccacctcca
agatatacggaggcaacgctggtcaaagccctggaagagaagggaataggaaggccgagc
acttatgctcctacaataaccaccattcttgcaagaggttatgtcgaaaaggaaaaaaag
tttttagttcctacggaactgggtaaaatagtaacagatataatgaaaaatcattttaag
gatatagtggatgtccagtttaccgcccagctggaagataaactcgatagtgtcgagacg
ggagaaaagaaatgggtggatgtcatgaaggaattttatggcccctttgaaaaggtactg
aaagaagcagaaagccagataggggaagttaacattccggatgaggttacggatattaaa
tgtgagaaatgcggaagaaacatggtaatcaaaaacggaaggtacgggaaatttctagca
tgtcccggcttccctgagtgcaggaatgcacgaccgattcttgaggaagcaggcgtaaat
tgccccaaatgcggcggcaaggtgatgataaagaagacaagaaagggcaaaaaatatctg
ggatgtgaaaataatcccaactgtgattttatgacatggaacatgcccgccggtgaaaat
tgtcctgaatgcggcaatttcctggaaaagaagtattcgggcaaaaaggtggtcttaaaa
tgcagcaatgaaaaatgcggctttgaaaagcaggaggaaaagtctgaaaaagaagattag
DBGET
integrated database retrieval system
