Clostridium thermosuccinogenes: CDO33_09185
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Entry
CDO33_09185 CDS
T05300
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cthd
Clostridium thermosuccinogenes
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cthd03016
]
CDO33_09185
Enzymes [BR:
cthd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CDO33_09185
Transfer RNA biogenesis [BR:
cthd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CDO33_09185
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF6250
Acb1
DUF4785_2nd
Dynein_heavy
Motif
Other DBs
NCBI-ProteinID:
AUS96595
UniProt:
A0A2K2F847
LinkDB
All DBs
Position
complement(2094455..2095006)
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AA seq
183 aa
AA seq
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MRAFIGVDFSKEMKAAISSLQDRLKPYASYGRWKYIDNFHLTLKFLDEINDGKVDEIGGR
LKIICQENKQFVLNVNEIGKFQGKSDLRVLWLGLGGDLDKLNRLQQDIENGMHSLGFSKE
KRPYVPHITIAQDILFTVDFRQVMKIAAEMSFPEISVEKVCLFKSEQIGRKRVYTPIREY
ALG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagagcatttattggtgttgattttagcaaagaaatgaaagctgccataagcagtctg
caggatagattaaagccctatgcttcctatggaagatggaaatatattgataattttcat
cttacactgaaattcctggatgaaataaatgacgggaaagtggatgagataggaggccgg
ttgaagatcatctgccaagaaaacaagcagtttgtcttaaatgtgaatgaaatcggaaag
ttccagggaaagagcgatctgagagtcctctggctgggcctgggtggcgatttggacaaa
cttaacaggcttcagcaggatattgaaaacgggatgcattccctcggattttcaaaggag
aaaaggccatatgttcctcatattacaatagcacaggatattttgtttacggtggatttc
agacaagtaatgaagattgccgcagaaatgagttttcctgaaatttcagtagaaaaggta
tgtttgttcaaaagtgagcaaataggaaggaaacgggtttatacgcctatccgggaatat
gctcttggatag
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