Clostridium thermosuccinogenes: CDO33_09520
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Entry
CDO33_09520 CDS
T05300
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd03420
Nucleotide excision repair
cthd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDO33_09520
03430 Mismatch repair
CDO33_09520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_09520
Enzymes [BR:
cthd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDO33_09520
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDO33_09520
MMR (mismatch excision repair)
Other MMR factors
CDO33_09520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_11
AAA_22
SH3BGR
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUS96656
UniProt:
A0A2K2FLC1
LinkDB
All DBs
Position
complement(2176507..2178759)
Genome browser
AA seq
750 aa
AA seq
DB search
MGLRKGQKELVEQYRGGFCAVPAIPGGGKTHCLSIWAAEMIAQGLHKPGKILIVTYMNSA
VNNFRQRIAKELARRGISGNKDYVVSTIHSLCLKIVKEKPDLISTNEEFEIIDEVTKFHL
ISSAVDEWRRKNEDIFRYYLEESNLSANKLSENYKKWNDRLCGVVLGAIGDFKSHGMKPL
QARESCRKLPETSLLKHAADIYAIYDKKLKMSGFLDFDDMLYNAKELLTMDSSLLEKYRK
KFTFVCEDEAQDSNLIQSEILTLIADGNLLRVGDSNQAICGSFSNSDFTLFKSFCEKPET
VVYRITQSSRNTREIIDLANYFVKLVREEHPVPECRESLLPQFIEPVDPHDERQNPVTTE
YGIKAQIYGSWDEEVNSVVTEVIRMVKRHPDKTISVLVPNSYKMRDIVRCLEDKNIPFEQ
LDNTSDERNRTIKVLGRIIDFIAEPENGEKFGAMMNECFLRDKYEDEMPESEFNPDMHGK
ESQREMLTAFLRKYPVEKLLYPAAGEIDIREIPPELLKSKIWRDFTDKLETVRGFLEFPT
TVVEKLILYISEKLNFGREERAIAQKVAGDVRYLMNQNPRWRLSDLALELLSPKNMFNFF
AGIVWELKGYEPKPGVVTVATYHKSKGMEWDIVFLTGLNYADFPVYLTDKFVGEYWFLKQ
EYKNPQALVKADLEKILGAGTGEDSILKSKIETISERARLLYVGITRAREYLYLSGFHAN
QGKWNENLPSKYLLDIKKHIEEVGAKWTGI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggattacgaaagggtcaaaaagagctggtcgaacaatatcgaggcggattttgcgcg
gttccggccattcccggcggcggtaaaacccactgcctttccatctgggctgcggaaatg
atagctcaggggctgcataaaccgggaaaaatacttattgttacatatatgaacagcgcg
gtaaacaatttccggcagaggatagcaaaagagctggcaagaaggggtatatcgggaaat
aaggattatgtagtatccacgatacacagcctgtgccttaaaattgtaaaggaaaagccg
gatttaattagcactaatgaagaatttgaaatcatagatgaggtcaccaaatttcatctt
ataagcagtgcggtggatgaatggagaagaaaaaatgaagatatattcagatattatttg
gaagaatccaacctgagcgccaacaagctctcagaaaattacaaaaaatggaatgacaga
ctttgcggagtagtgctgggggctataggcgactttaaaagccatggcatgaagccgctg
caggccagggaaagctgcaggaagcttccggagacttcccttttgaaacatgcggccgat
atatatgccatttatgataaaaagctaaagatgagcggatttctggattttgacgatatg
ctttacaatgcgaaggagctgcttaccatggacagcagccttcttgaaaagtatcgcaaa
aagttcacctttgtctgtgaggatgaagcccaggattcaaacctcatccagagtgaaata
cttacactgatagccgatggaaaccttttgagggtgggagacagcaaccaggccatttgc
ggcagcttcagcaacagtgacttcaccctgttcaaaagcttttgtgaaaagccggaaact
gtcgtttacaggataacccagtccagcaggaacacaagggagataatcgatctggccaac
tattttgttaagcttgtgagagaagagcatccggttcctgaatgcagggagagccttctt
cctcagtttattgagccggtggacccccatgatgaaaggcaaaaccccgtcaccactgaa
tacggaataaaggcgcagatatacggttcatgggatgaggaagtaaattcggtggtcacg
gaagtgatccgcatggttaagaggcacccggacaagacgatatcagtgctggttcccaac
tcctacaagatgagggatatagtgcgctgcctggaagataagaacataccctttgagcag
ctggacaacacttcggacgaaaggaacaggaccatcaaggttctgggcaggatcatagat
tttattgcagagccggaaaacggagagaagtttggtgccatgatgaatgaatgcttcctc
cgtgataaatatgaagatgagatgccggaatcggaatttaacccggacatgcacggcaag
gaaagccagagggagatgctcacggcattcctgagaaaatatccggtggaaaagctgctg
tatccggcagctggggaaatagacatacgggaaataccgccggagctcctcaaatcaaag
atatggagggactttactgataagctggagacagtgagagggtttttggagtttcccacg
acagtggtggaaaagctgatattgtatatatcggaaaagctgaactttggcagggaggaa
agggccatagcccagaaggtcgccggggatgtaaggtatctcatgaaccagaacccgaga
tggaggctcagcgatctggcgttggagcttttgagccccaagaacatgttcaactttttc
gccggcattgtatgggagcttaagggatacgagccaaaacccggtgtggtgaccgtagcc
acctatcacaagtcaaaagggatggaatgggatatagtgttccttacagggcttaattac
gctgatttccctgtttatcttaccgataagtttgtcggagaatactggttcctgaagcag
gaatataaaaatccccaggccttggtaaaggccgatctggaaaaaatccttggggccggt
accggggaggactcaatactgaagtcaaaaatagagactatatcagaaagagcccgtctg
ctatatgtaggaataaccagagccagggagtatctttacctctcaggttttcatgccaat
caaggaaaatggaatgaaaacctgccgtcaaaatatcttttggatattaaaaagcatatt
gaggaggtgggcgcaaaatggacagggatttga
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