Clostridium thermosuccinogenes: CDO33_09980
Help
Entry
CDO33_09980 CDS
T05300
Name
(GenBank) ABC transporter
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDO33_09980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cthd02000
]
CDO33_09980
Transporters [BR:
cthd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CDO33_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
RsgA_GTPase
nSTAND1
KAP_NTPase
AAA_23
AAA_29
HUTI_composite_bact
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AUS96737
UniProt:
A0A2K2FP66
LinkDB
All DBs
Position
complement(2293499..2295256)
Genome browser
AA seq
585 aa
AA seq
DB search
MKRYWKYVKPYLPAFIIGPVLMIVEVIGEVVMPLLLSNIIDKGVNGGRSISYIIMMGVAM
VITAFIMMAGGTGGAFFAIKASSGFANDLRKDLFNKIQKFSFANIDRYSTGSLVTRLTND
VTMIQDMIQMMLRMALRAPGMFIGALIMAFSLNPKLATVIMCIIPILAFTIYCIIKTGFP
RFEAMQKKLDALNTATQENLTNIRVVKSFIREKYEEEKFKRANTDLKDSTIHALKVVIFA
IPVVTLAMNVTTLAVVWFGGRQVIAGSMTTGILTAFVNYVVQILMSLMMVSMIILNSSRV
LASIKRINEVFNTDIDLTDEHASRKDLTVAHGKVEFRNVCFKYYKNNAKWVLENINLVIN
PGETVGIIGSTGSGKSSLVQLIPRLYDADQGEVLVDDVNVKDYSLKNLRDGVGIVLQKNV
LFSGTIKENLKWGNEDADDELVCKFAESAQAHGFISSFKDGYETELGQGGTNVSGGQKQR
LCIARALLKRPKILILDDSTSAVDTATEAKIRESLRNELKNTTKIIIAQRISSVIEADKI
VVIDDGKITGIGTHEELMRDCEAYKEIYYSQMDKEHPQMNKEVTA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatattggaaatatgttaaaccatatcttcccgcatttatcataggacccgtt
cttatgattgttgaggttataggtgaggtagtcatgccgctcctgctcagcaatatcatc
gataaaggagtaaatggaggcaggagcatttcttatataatcatgatgggtgtggcaatg
gtgataacagcgttcatcatgatggcgggaggtaccggaggtgctttttttgccatcaag
gcatcctcaggatttgccaacgatttaaggaaggaccttttcaacaaaattcagaagttt
tcctttgccaatattgaccgatatagcacaggctctttggtcacacggttgaccaacgac
gtaaccatgatacaggatatgatccagatgatgctgaggatggctttgagggctccgggc
atgtttatcggtgcgctaattatggccttttcattgaatcccaagctggcaacggttata
atgtgcatcattcccatattggcattcaccatctactgcataataaagaccggatttcct
cgctttgaagccatgcagaagaagctggacgcattaaataccgccacccaggagaatctg
acgaatatccgggttgtcaaatcctttatacgggagaagtatgaggaggagaaattcaag
agggcaaacacggacttgaaggacagtacaatccacgcactgaaggtagtcatttttgcc
atcccagtggtaaccttggctatgaatgtcacaaccttagctgttgtatggtttggcggc
aggcaggttatagcgggaagcatgaccacaggaattcttaccgcatttgtgaattatgtg
gtccagattttgatgtctttgatgatggtttccatgattattctgaacagctccagagtg
ctggcatcgataaagcgtattaatgaggttttcaacacagatatcgaccttacggatgaa
catgcttccagaaaggatttgactgtagcccatggcaaggttgaattcagaaacgtgtgc
tttaaatactacaaaaataacgcaaaatgggttcttgaaaacattaatctggtaataaac
cctggagagacggtgggaatcatcgggtcaacaggttccggcaagtccagtcttgtacag
cttattcccaggctgtacgatgcagaccagggggaagtgctggtggacgatgtgaatgtg
aaggattactccttgaagaatctcagggacggagtcggcatagtgctccagaaaaatgtc
cttttttccggcacaattaaggaaaacctcaaatggggaaatgaagacgcggatgacgaa
ttggtatgcaagtttgcggagagcgcgcaggcccatggatttatctcatcctttaaagat
ggatatgaaactgagttgggccaaggtggtaccaacgtttccggcggacaaaagcagaga
ttgtgcattgccagggcgctgctgaaaaggcctaaaatcttaattctggatgacagcacc
agcgcagtggacacggcaacagaggcaaaaatcagggaaagcctgagaaatgaattgaag
aacacgacgaaaatcatcattgcccagagaatttcttctgtgatagaggcagacaaaatc
gtggtgattgatgacggaaagatcaccggaataggcacccatgaagaattaatgagagat
tgtgaagcatataaggagatttactattcgcagatggataaggagcatccccaaatgaac
aaggaggtgacggcataa
DBGET
integrated database retrieval system