Clostridium thermosuccinogenes: CDO33_10390
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Entry
CDO33_10390 CDS
T05300
Name
(GenBank) helix-turn-helix domain containing protein
KO
K07482
transposase, IS30 family
Organism
cthd
Clostridium thermosuccinogenes
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CDO33_10390
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GFIT
Motif
Pfam:
HTH_38
Sigma70_r4_2
HTH_Tnp_ISL3
Sigma70_r4
Phage_antitermQ
KORA
Motif
Other DBs
NCBI-ProteinID:
AUS96811
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Position
2392015..2393313
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AA seq
432 aa
AA seq
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MRGFKHLSQEERNIIEQRLISRKSFKSIARELGKDPTTISKEVKNHIQFRKTGCYGRVFN
DCKHRIGCPVKHLCGSLRCSRYCRACKSRMCSSLCHEYQQEICPKLSKPPYVCNGCEDKQ
SCTLEKRIYSATHAQREYETVRSECRQGLQITEEEAIRLDSIISPLLIKGQSLHHICINH
ADEIMLDERTLYNYVDKGIFTAKNIDMPRVVRMGRRKKGKDQFKVDKKCRIGRTYQDFLK
FMQEHPDLPVVEMDTVIGRIGGKVLLTLHFTVPQLMLAFIRDANTSQSVIDIFDQLYLEL
GPDTFRKLFPVLLCDNGSEFSNPSAIEFDSHGQRRTCVFYCNPLAPYQKGAAENNHALIR
RIIPKGTSLDEFTQRDITLMMNHINSYSRLNLGDKTPYWAFGLLYGEEILRRMNVELIPT
DNVTLHSSLLKK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggctttaaacatttgagtcaggaagaaagaaatataattgaacaaaggttaatc
agcaggaaatcattcaaaagcatagcacgcgagcttggaaaggacccaaccacgatatcc
aaggaagtgaagaaccatatccaatttaggaaaaccggctgttatggaagagtgttcaat
gattgtaaacatcgtattggttgccctgttaagcatctttgcggcagtttgcgttgtagc
cgttattgtcgcgcttgcaagtctcgcatgtgttcatcactatgtcatgagtatcaacag
gaaatttgtcccaagctttcgaagccgccctatgtttgtaatggttgtgaagacaaacag
tcttgtacattagagaagaggatttattctgcaacacatgcacaaagagaatacgagaca
gtacgctctgagtgccgtcagggtttacaaatcactgaagaagaagcgataagattggat
tccattattagcccgctgctaattaaaggccagtcactccaccatatatgcattaaccat
gctgatgaaatcatgctcgatgaacgcacactctacaactatgtggacaagggtatcttt
acagcaaaaaatatcgatatgccaagagttgtacgtatgggcagacgtaaaaagggaaaa
gaccagttcaaagtggataaaaaatgccgaataggccgaacttatcaagactttcttaaa
tttatgcaagagcatccggaccttcccgtagtggaaatggacacggtaataggaagaata
ggcggcaaagtcctgctgacactgcattttactgtcccacagctcatgctcgcattcatt
agagatgctaatacctcccaatctgtcattgatatctttgatcagctttacctggaacta
ggcccggataccttccgcaaattgttcccggtattactttgtgacaacggcagtgagttc
tcgaatccgtccgctattgaattcgattcacatgggcaacgcagaacctgtgtattctac
tgtaatccgctggctccttaccagaaaggcgcagcagaaaacaaccatgctttgattaga
cgcattatcccaaagggtacttctcttgatgagtttactcagcgggacataactcttatg
atgaaccatatcaactcgtacagtcgactgaatctcggggataaaaccccttattgggct
tttggattgctctacggggaagaaatattaagaaggatgaatgtagaactcatcccgaca
gataatgtcaccctgcattcatcccttcttaagaaataa
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