Clostridium thermosuccinogenes: CDO33_11665
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Entry
CDO33_11665 CDS
T05300
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDO33_11665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_11665
Enzymes [BR:
cthd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CDO33_11665
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDO33_11665
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDO33_11665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_TFIIB
DNA_ligase_ZBD
NFACT_N
Lar_restr_allev
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
AUS97035
UniProt:
A0A2K2FFZ8
LinkDB
All DBs
Position
complement(2699070..2699894)
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AA seq
274 aa
AA seq
DB search
MIELPESRNLVQQINETLKGKKIQNVTANKSPHKFVWFNCDPESYHGLLTGKSILYAAAY
GGMVEIQVEDIRLVFHEGVNMRYYFPGEELPEKHQLHIEFDDFSSFVCSVQMYGALLALS
EGQTDAYNECAREKPSPFSDDFNQSYFLSLLNNEGIKLSAKAFLATKQRIPGLGNGVLQD
ILFNARVHPKRKMNTLSDDELTSLFNSIKSTLFEMTINGGRDTEKDLFGCSGAYRTILSA
KTAGKPCPVCGGAIIREAYLGGNVYYCPECQKLK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgattgagttgccggaaagccggaatttggttcagcaaatcaatgaaaccctgaaagga
aagaagatccaaaacgtaactgctaataaatcaccccataaattcgtgtggtttaattgt
gatcccgaaagttaccacggtctgcttacaggtaaaagcattctgtatgctgcagcatac
ggaggcatggtggaaattcaggtcgaggatatacgtcttgttttccatgagggtgtcaat
atgcgttactatttcccgggagaggagcttcccgaaaagcatcagctccatattgaattt
gatgatttttcctcctttgtttgcagtgtgcagatgtatggtgcattgttagccttaagt
gaggggcagacagatgcttataatgaatgtgcgagagaaaaaccaagtccattctcggat
gattttaatcaaagttattttctgtctcttcttaataatgagggcatcaagctttcagcc
aaggcatttttggcaacaaagcagcggataccgggtcttggaaacggcgttttgcaggac
atcctgtttaacgcacgggtgcatccgaagcgcaaaatgaacaccttatctgatgatgaa
ttgacttctttattcaactccatcaaaagcactctttttgaaatgaccataaatggcggg
cgggataccgaaaaagacctattcgggtgcagtggggcctatcggaccattctttcagct
aaaactgccggcaagccttgtcccgtatgcggcggagcgattatccgtgaggcatacctc
ggtggaaacgtatactactgcccggagtgccagaagctgaagtag
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