Clostridium thermosuccinogenes: CDO33_16265
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Entry
CDO33_16265 CDS
T05300
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cthd
Clostridium thermosuccinogenes
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthd03009
]
CDO33_16265
Enzymes [BR:
cthd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CDO33_16265
Ribosome biogenesis [BR:
cthd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CDO33_16265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AUS97860
UniProt:
A0A2K2F5Q9
LinkDB
All DBs
Position
complement(3709635..3710363)
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AA seq
242 aa
AA seq
DB search
MRETERLDKILSNFGYGTRKEVKQLVKSGVIKVNGITAKDSGMHVDPVNDVIEIGDEVLC
YRKYIYLMMNKPEGVISATYDNRLRTVVDILPDEYKCFDLFPVGRLDIDTEGLLIMTNDG
QLAHELLSPKKHVPKRYYVLVAGTVTDQDAAIFKEGVVLDDGYKTLPAHLDIIVSGDRSE
IELVIYEGKFHQVKRMFEAVGKKVKYLRRIAMGSLELDKSLQPGECRELTEDEVNLLKSF
GT
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttgagggaaacggaacgattggataaaattctgtccaactttggttatggtacccgcaag
gaggttaagcagctggtaaagagcggtgtcattaaggtaaacggaattaccgcaaaggac
agcggcatgcatgtcgaccctgtcaatgacgtcatagagataggggacgaagtgctttgc
tatagaaagtacatatatctcatgatgaacaagcctgagggagtgatatcggccacatat
gacaacaggctcaggacggtggtggatatactgccggatgaatataagtgctttgatttg
tttccggtgggaagactcgatatagataccgaagggctgctcataatgacaaatgacggg
cagctggcccatgaactgctgtctcctaaaaagcatgtcccgaaaaggtattatgtgctg
gtggccggaaccgttaccgaccaagatgctgccatattcaaagagggagtggttcttgat
gacggctacaaaaccttgccggctcatctggatatcattgtgtcaggagaccggtctgag
atagagcttgtaatatatgagggcaaatttcaccaggtaaagaggatgtttgaggccgtc
ggcaagaaggtgaaatacctaaggcgcatagccatgggaagcctagaactcgataaaagc
ctccagcccggtgaatgcagggaacttacagaggatgaggtcaacctcctgaaaagcttc
ggcacataa
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