Clostridium thermosuccinogenes: CDO33_17675
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Entry
CDO33_17675 CDS
T05300
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDO33_17675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthd03021
]
CDO33_17675
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_17675
Enzymes [BR:
cthd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDO33_17675
Transcription machinery [BR:
cthd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDO33_17675
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDO33_17675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
RAD51D_N
TfoX_C
Motif
Other DBs
NCBI-ProteinID:
AUS98118
UniProt:
A0A2K2EXG1
LinkDB
All DBs
Position
complement(4061066..4062010)
Genome browser
AA seq
314 aa
AA seq
DB search
MEMEKPKIECVATSEDNTYGKFVVEPLERGYGITLGNSLRRILLSSLPGVAVTSIKIDGV
LHEFSTIPGVIEDVTEIILNIKEISFKLNGEGPKVVYIDADGEGEVTAGDIKADADVEIL
NPNHHIATLNGDHRLYMELTINKGRGYVSAENNKQPGQPIGIIPVDSIYTPIRKVNYTVE
NTRVGQFTDYDKLTLEVWTNGSIKPDESISLGAKILSEHLNLFIDLSDHAKHAEILVEKE
ETKKEKVLEMTIEELDLSVRSYNCLKRAGINTVEDLTNRTEEDMMKVRNLGRKSLEEVLQ
KLGALGLSLAPSEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaagccaaagattgaatgtgtagccacaagtgaggataacacttacggg
aaatttgttgtggaacctctggaaagaggatatggaatcacactgggaaactcattgaga
aggatacttttgtcatctttgccgggtgttgctgtaacatcaataaagattgacggtgtt
ttgcatgagttttccaccatacctggagtaattgaggatgtcacggaaattatcctgaac
attaaggagatatcctttaagcttaacggagaaggccccaaagtagtttatattgatgct
gatggtgaaggagaggttactgccggagacattaaagctgatgccgatgtggagattctt
aatccaaatcatcatatagctacgttgaatggtgaccacaggctgtacatggagttgacc
atcaacaaaggcagaggatatgtttccgctgagaacaacaagcaacctggtcagccaata
ggtattattccggttgattcgatctatacaccgatcagaaaggtcaactatactgtagaa
aatacccgtgttggccagtttacagattatgacaagcttactctggaagtttggacaaat
ggaagcataaagccggacgagtcaataagccttggggcgaaaatattgagcgaacacctg
aaccttttcatcgatctctcagatcatgcaaaacatgctgagatattggtggaaaaggaa
gagaccaagaaggaaaaagttcttgagatgactattgaggaactggatctctccgtaagg
tcgtacaactgcttgaagagagcaggtataaatacggtagaagacctgacaaacaggacg
gaagaggatatgatgaaggtaaggaacctcggaagaaagtctcttgaagaggtacttcaa
aagcttggtgctttagggttatcgcttgcacccagtgaagaatga
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