Clostridium thermosuccinogenes: CDO33_17870
Help
Entry
CDO33_17870 CDS
T05300
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
cthd
Clostridium thermosuccinogenes
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cthd03021
]
CDO33_17870
Transcription machinery [BR:
cthd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDO33_17870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
GerE
HTH_11
MarR
HTH_10
DUF1492
KORA
NirdL-like_HTH
HTH_17
HTH_24
HTH_37
Fe_dep_repress
HTH_31
DUF1638
HTH_AraC
DUF134
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
AUS98152
UniProt:
A0A2K2FIU6
LinkDB
All DBs
Position
complement(4090198..4090974)
Genome browser
AA seq
258 aa
AA seq
DB search
MKANNHQTVAANTTDFNEVSEEALFLKYRDNPTVENRNEIVNKYLYLADIITRKFLNRGM
DYEDIYQVACIALIKSVERFSLEKGVKFVSFATPTIIGEIKRFFRDKAALIRIPRRIYEI
YQKVNHARETLSYELQRVPRVDEIAEYLNISEETVLETIESWNAYSIQSFDQTVYSDDDI
ELHETIGAEDSTFEKIENRDFLRQSLNKFNQAEREFIKMRYFGNQTQKQIADKLGVSQMY
VSRLEKKVLERFRKILEQ
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctaacaatcatcaaaccgttgctgcgaacactaccgatttcaatgaggtaagt
gaggaagcactatttttaaaatacagggataatcctactgtagagaacagaaacgagatt
gtgaataaatacctgtatctggctgatatcataacccgtaaatttctgaacaggggaatg
gattatgaagacatatatcaggtggcgtgcattgcgcttattaagtctgtagagcgtttc
agcctggagaagggtgttaaattcgtaagttttgcaactcctaccattatcggagagata
aaaaggtttttccgggataaagctgctttgataagaatacccaggagaatttatgaaata
taccaaaaggtgaaccatgcgcgggaaactttgtcatatgagctgcaaagggtgccgagg
gttgacgaaatagcagagtatctcaatatcagtgaagaaactgtacttgagactattgaa
tcgtggaatgcatatagcattcagtcctttgatcaaacggtttattccgatgacgatata
gaattgcatgagactataggtgctgaagacagcacgtttgagaaaattgaaaacagggat
ttccttagacagagcctgaataaatttaaccaggcggagagggaattcataaaaatgaga
tattttggcaatcagacccagaaacagattgcagataagttaggggtttcccaaatgtac
gtctccaggcttgagaaaaaggttctggagcgcttcaggaaaatactcgagcaataa
DBGET
integrated database retrieval system
