Clostridium thermosuccinogenes: CDO33_19115
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Entry
CDO33_19115 CDS
T05300
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd03420
Nucleotide excision repair
cthd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDO33_19115
03430 Mismatch repair
CDO33_19115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthd03400
]
CDO33_19115
Enzymes [BR:
cthd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDO33_19115
DNA repair and recombination proteins [BR:
cthd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDO33_19115
MMR (mismatch excision repair)
Other MMR factors
CDO33_19115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
ResIII
DEAD
NACHT
AAA_30
PH_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AUS98378
UniProt:
A0A2K2FJI6
LinkDB
All DBs
Position
complement(4393582..4395876)
Genome browser
AA seq
764 aa
AA seq
DB search
MPAENHPDYKAELEHSRYILGYVEKSLEATIAKKQKIDSDVDRMKKHFNSDNSQNYIDLM
VNTTLQDSLTIRLKNLIAARSKPYFARIDFREDGKEKAEQLYIGKMSLMRDEDQKIIIID
WRAPISSLYYEERLGRAGYLCPDGRIEGDLMLKRQFSFEEGVLKDIFDIDITTNDEFLQA
HLGANADNRLKDIVSTIQAEQNRIIRADMWTPLIVQGVAGSGKTTIALHRIAYLVYTYEK
SFEPENFMIIAPNKLFLNYISEVLPELGVDKVKQTTFEDFAMELIGKRLKIRDANEKLVD
FVDRNSTEEQIARNELVRKASEFKSSMTFKEVIDDYIEAIERDYIPKKDFKIGSQVIYSY
EEINDLFLRQYKTWPVAQRLNEIKKHLNNRFKVKKESIINNLHDQCDAKIRKIKATMAES
EERQKLIIRLIDKKNAIIDKLQTYSKKAANEYIKGISKLNPMEYYKELIMKEDLFYRLVE
GKLPKRQAEFLREHTEKVLKSGFVELEDLAPIIYLKYKIYGMDEKIPVKHIVIDEAQDFS
VFQLYVIKKIVRDSSFTILGDLCQGIHSYRGILDWSDVMKHAFDDRKSQMLTLEQSYRTT
VEIMEAANKVIGRIDALRPFMGKPVIRHGEKVRLIKKQNLKEIASDILDKIDEFKEAGYK
SIAVICKTMDECKDMASLMKKGGNSPVIITGGEKEYKSGVVIVPSYLAKGLEFDVVMIAN
ANRERYGAGELDTKLMYVSMTRPLHKLYIYYHGELTPLLEEVAE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggaaaaccatccggattataaagcagagcttgaacacagcaggtatatcctg
ggatacgttgaaaagagcctcgaggccaccattgccaagaagcagaaaatagacagcgat
gtggacagaatgaagaagcatttcaactcggataacagccagaactatatcgacctcatg
gtgaataccactcttcaggacagccttaccatcaggcttaaaaacctgattgccgccaga
agcaagccttattttgcgagaatcgatttccgcgaggacggaaaggaaaaagcagaacag
ctgtatataggaaagatgtccctgatgagggatgaggatcagaagataatcatcatcgac
tggagggctcccatttccagcctgtattacgaggaaaggctggggagggccggatatttg
tgtcctgacggccgcatagaaggcgacctgatgctaaaaaggcagttttcctttgaagag
ggagtgctgaaggacatatttgacatagacattaccaccaatgatgagtttttgcaggcc
catctcggagcaaatgccgacaaccgcctgaaggatatagtttcaaccatacaggcggag
cagaacaggataataagggcagatatgtggactcccctgatagtacagggtgtggcgggc
agcggtaagaccacgatcgccctgcacaggatcgcttatctggtatacacctatgaaaag
agttttgaacctgaaaatttcatgataatagcccccaataagctgtttctcaactacatc
tccgaggtgcttccggagctgggggtggacaaggttaagcagaccacttttgaggacttt
gccatggagctcatcggtaagaggctgaaaatccgggatgccaatgaaaaactcgtcgat
tttgtagaccgaaacagcaccgaagagcagatagcccgaaatgagcttgtccgaaaagca
tcagagtttaaatcttccatgaccttcaaggaagtcattgatgactatatagaagcgata
gaaagggattatatcccgaaaaaggatttcaagataggctcacaagtgatatacagctat
gaggaaatcaatgacctctttctccggcaatataagacttggccggtagctcagagattg
aatgaaataaaaaagcacctgaacaaccggtttaaggtaaaaaaggaatccatcataaac
aacctccatgaccaatgtgatgcaaagataagaaaaataaaggctactatggcagaatcg
gaggagaggcagaagctcatcatccggctgatagataaaaagaatgccattatcgacaag
cttcagacgtactccaaaaaggccgccaatgagtatataaaaggaatatcaaagctgaat
cccatggagtattataaagagctcatcatgaaggaggatctcttttacaggcttgtggag
ggtaaacttcctaaaaggcaggccgaatttctgcgggagcatactgaaaaagtgctcaaa
tcaggctttgttgaactggaagatttagcccccatcatatacctcaaatataaaatatac
gggatggatgagaagattcccgtaaagcatattgtcatcgacgaggcccaggatttcagc
gtatttcagctttatgtgataaaaaagatagtgagggacagctcgtttaccatccttggg
gacctgtgccagggcatacattcctacaggggtattttggactggtccgacgttatgaag
catgcctttgatgaccgcaaaagccagatgctcacccttgagcagagctacagaaccacg
gtggaaataatggaggcggcaaacaaagttatcggcaggatcgatgccctgcgtcccttc
atgggaaagcctgttataaggcatggtgaaaaggtgcggctgataaaaaagcaaaatctg
aaggaaattgcatcagatatactggacaaaattgatgaatttaaggaagccggttataag
tccatagcggttatatgcaagacgatggacgagtgcaaggatatggcttcattgatgaaa
aaaggcggcaattcaccggtcataattaccggcggagaaaaggaatacaaaagcggggtt
gtaatcgtgccttcatatctggcaaaaggcctggaattcgatgtggtgatgatcgccaat
gccaatagagaaagatatggggccggtgagctggataccaaactgatgtatgtctctatg
acgaggccgctgcataaactgtatatatattatcatggagagctgactcctttgcttgag
gaagtggcagagtag
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