Chroococcidiopsis thermalis: Chro_0942
Help
Entry
Chro_0942 CDS
T02360
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
cthe
Chroococcidiopsis thermalis
Pathway
cthe02010
ABC transporters
cthe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Chro_0942
03070 Bacterial secretion system
Chro_0942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cthe02000
]
Chro_0942
02044 Secretion system [BR:
cthe02044
]
Chro_0942
Transporters [BR:
cthe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Chro_0942
Secretion system [BR:
cthe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Chro_0942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
cNMP_binding
AAA_22
ABC_ATPase
AAA_16
AAA_29
DUF87
RsgA_GTPase
AAA_23
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AFY86476
UniProt:
K9TWB7
LinkDB
All DBs
Position
1059316..1062249
Genome browser
AA seq
977 aa
AA seq
DB search
MTATISSSQFQAFLAQTNLFHPLPATTLQELATKCHLWRYRIGQPLLVREKMPTQVLVIY
QGTARLIGYDRRQQSPVSLGLVEPKTVLGWAGLIRNIPCETAIASTEVICIAIPAADFLA
SLSAEPTFAQHVKAQFSPAELCELLSLELQRRADSATKLKDLVFQLSPSVEVLNLAPGQA
DGTRLRGDRTWLISSGAEAIVGNRFELNGSAPTITEPGVRLLGVKLPQEIERTMPVVLAP
TDLEVPYAPEQPPVAPATNTKSVKYPFVRGQGEISAAMACFQMLCQYLGVSWRRDTVRRV
LENQQKSLGTISLQSCGAIAEMLGMSAQLIQVPSKAIARIKTPALIRYHDSLAILYACDD
KELTLAVPEIGIHRQTPADFARAWGEGGQVLLLQARPGEKTERFSLRWFLPAIAHHRGVL
IEVLIASFFVQLFGLANPLVTQVIIDQVLVNGALDTLNVLGILLLGVALFEALLTGVRTY
LFVDTTNRIDIALGSEVIDRLLRLPLSYFDRRRVGELASRINELENIRQFLTGTALTVVL
DAVFSVIYIAVMLFYSWILTLVALATVPVFALLTIFVAPIVRKQLRVKAERYADTQSYLV
EVVSGIQTVKAQNIELKSRWHWYERYARYISAGFNTVVTSTTASSVSGFFNKFSGLLLLW
VGAYLVISQQLTLGQLIAFRIISSYTTSPLLRLIQLWQNFQETALSIERLGDILDAHPEV
DEANRAQLPMPEIEGAVKFDGVSFRFGNSGVFQLTNVNLEFPAGTFVGIVGQSGSGKSTL
TKLLPRLYEPTTGTIQIDNYDISKVELYSLRRQIGMVLQDTLLFNGTVQENIALTNPEAS
SEQIIAAAKIAVAHDFIMSLPNGYNTNVGERGSALSGGQRQRIAIARTVLQNPKLLILDE
ATSALDYDSERQVCQNLAEAFHSRTVFFITHRLATVKNADAILVMDKGVVVEQGTHQQLM
ALRGRYFCLYQQQESQL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgacagctactatttctagctctcaatttcaggcatttctcgctcaaacaaatttattc
catccgctgccagcaacgactttacaggaattagcaacgaaatgtcacttgtggcgctat
cggatcgggcaaccgctactcgtgcgggaaaaaatgccgacgcaggtgttagttatctac
caagggactgctagattaatcggctacgatcgccgccagcaaagccccgtaagtttgggt
ttagtcgaaccgaaaaccgtcttggggtgggcgggtttaattcgcaacattccctgtgaa
accgcgatcgcctctacggaagtcatttgtattgcgattcccgccgccgactttttagca
agtctttcagccgaaccgacttttgcccaacacgtcaaagcgcaattttctcctgcggaa
ttgtgcgaactcttgagtttagaactccaacgtcgcgccgacagtgccacgaaactgaaa
gacttggtatttcaactaagtccgtccgtcgaggtactgaatttagccccagggcaagca
gatgggacgcgattgcgtggcgatcgcacttggctgattagtagtggagcggaggcgatt
gtcggcaaccgtttcgagctgaacggttcagcccccacaattacagagccaggcgtgcgg
ctgctgggcgtgaaattaccccaggaaatcgaacgaactatgcccgtcgtacttgctcct
accgatctagaagttccctacgccccagaacaacccccagtagccccagcaaccaacacc
aaatccgttaaatatcccttcgtgcgcggacagggagaaattagcgcggcgatggcttgc
ttccaaatgttgtgtcaatatttgggcgtatcgtggcgacgggacacggtgcggcgggta
ttggaaaatcaacagaaatctctcggaacaatttctttgcaaagctgcggcgcgatcgcc
gagatgttgggcatgagcgcccaattaattcaagtccccagcaaagcgatcgcgcggatc
aaaactcctgctttaattcgctatcacgatagcttggcaattctctacgcctgcgacgac
aaagaactgacgcttgccgttcccgaaatcgggattcaccgtcaaacccctgccgatttt
gcccgtgcttggggcgagggagggcaagtattgctgttacaagcgcgtccgggggaaaag
acggaaagatttagcttgcgctggtttttaccggcgatcgcccaccatcgcggcgtattg
atcgaagttttgatcgcgtcatttttcgtgcagctatttggtttagccaatcccctcgtt
acgcaagtcatcatcgaccaagttttggtcaacggtgctttggatacattaaacgtcctg
ggaattttgttgcttggggtagcgctatttgaagccttgctcacgggagtcagaacttat
ttatttgtcgataccaccaaccgcatcgacatcgctttgggttcggaagtgatcgatcgc
ctgctacgtctacctttaagttatttcgatcgccgtcgtgtcggggaattagcctcaagg
atcaacgagttagaaaatatccgccaattcctcacggggactgctctgacagttgtatta
gatgccgtgttctcggtgatctacatcgctgtgatgctcttttacagttggatactgaca
cttgtagccctggcaacagttccagtctttgccctgttgacaattttcgtcgcgcccatc
gtccgcaaacaactacgggtgaaagcagaacgctacgccgatactcagtcttatttagta
gaagttgtttcgggaattcaaacagtcaaagcgcaaaacatcgaacttaaatcgcgctgg
cactggtacgaacgctacgcccgttacatcagcgctgggtttaataccgtggtgacttcc
actacggcaagttcggtgagcggatttttcaataagttttctgggctattactgttgtgg
gttggggcatatttggtgatttcccaacaattaaccctgggacaattgattgcctttcgg
atcatttctagctacaccaccagtcccttattgcggttgattcaactgtggcaaaacttc
caagaaactgctttatcgatcgagcgtttgggtgatattctcgacgcacacccagaagta
gacgaggcaaaccgggcgcaactgccaatgcctgaaattgaaggggcagtcaaatttgat
ggcgtgtcttttcgctttggcaacagcggtgtgtttcaactgactaatgtaaatctagaa
tttcctgcgggtacgtttgtcgggattgtcgggcagagtggttcgggtaagagtacccta
acgaagttgttaccgcgtctgtacgaaccgacgacagggacgattcaaattgacaattac
gatatcagcaaagttgagttgtattccctgcgacgacaaatcggcatggtgttacaggac
acattgttatttaacggcacggtgcaagaaaatattgctctaacgaatccagaagcgagt
tcagagcaaattattgccgctgcgaaaattgccgtcgcccacgactttattatgtcttta
cccaacggttacaacaccaacgttggggaacggggttcggcactgtcggggggacagaga
caaaggattgcgatcgcccgtacggtactacaaaatcccaaattgctgattttggacgaa
gccaccagcgccctcgattacgattcggaacggcaggtttgtcagaatttggcagaagca
tttcactcgcgcaccgtatttttcattacccaccgtctcgccacagtcaaaaatgccgat
gcgatcttggtgatggataaaggcgtggtggtagaacaaggcactcaccaacaattaatg
gctttgagaggacgttatttctgtctctaccaacaacaggaatcgcaactgtaa
DBGET
integrated database retrieval system
