Chroococcidiopsis thermalis: Chro_1485
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Entry
Chro_1485 CDS
T02360
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cthe
Chroococcidiopsis thermalis
Pathway
cthe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Chro_1485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthe03400
]
Chro_1485
DNA repair and recombination proteins [BR:
cthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Chro_1485
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Chro_1485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
AAA_19
AAA_16
Kinesin
Flavi_DEAD
AAA_5
AAA
UB2H
Nitrate_red_del
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AFY87009
UniProt:
K9TYC5
LinkDB
All DBs
Position
complement(1652359..1654356)
Genome browser
AA seq
665 aa
AA seq
DB search
MMQFSLQAPFAPTGDQPSAIAQLVKSIQAGHRYQTLLGATGTGKTFTMAAVIEKIGKPTL
VLAHNKTLAAQLCNELREFFPNNAVEYFVSYYDYYQPEAYIPVTDTFIEKSASINDEIDM
LRHSATRSLFERRDAIVVASISCIYGLGMPAEYLRASIPLQVGMEVNQREILRSLASVQY
NRNDVEMGRGKFRVRGDVLEIGPAYEDRIVRVEFFGDEIDAIRYVDPVTGEILQSLEALN
IYPARHFVTPEDQLEFALEAIAAELKQRKAELEAENKLLEAQRIDQRTRYDLEMLREVGY
CNGVENYSRHLAGRQAGEPPECLIDYFPNDWLLVVDESHVTVPQIRGMYNGDRARKLVLI
DHGFRLPSAADNRPLKSEEFWAKVNQCVFVSATPGNWELEVSEGRVVEQVIRPTGVVDPE
IFVRPTEGQIDDLLGEIKQRVDRRERTLVTTLTKRMAEDLTEYLQDHGIRVRYLHSEINS
IERIEILQDLREGSFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRA
ARNVRGQAILYADNLTDSMAKAISETERRRAIQIEYNEKHGITPQQIVKKSSNAILSFLA
VSRRLNAQELETVYEQASDLPLEQIPELITQLEAQMKEAAKNLEFEEAAKYRDRIKHLRD
KLLGH
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatttagccttcaagcgccgtttgcacctacaggcgatcaaccgtcggcgatc
gctcaacttgtaaagtccattcaagccggacatcgttaccaaactttacttggagctacg
ggaacgggtaagacctttacaatggctgcggttattgaaaagattggcaagccaacactg
gtactcgctcataataaaacccttgctgcccaactttgtaacgagttgagagagtttttc
ccaaacaatgcggtggagtactttgtcagttactacgattactaccaaccagaagcctac
atccccgtcaccgatacatttattgaaaaaagcgcttcgatcaacgacgagatcgatatg
ctacgccactccgccacgcgatcgctctttgaacggcgagacgcgatcgtcgttgcttcc
atcagttgtatttacggcttgggaatgccagccgaatacctccgcgcctcgattccctta
caagtgggaatggaagtgaatcagcgggaaattttacgcagcttagcatccgtacagtac
aaccgcaacgatgtagaaatgggacggggaaaatttcgcgtacggggtgacgtattagaa
attggacccgcttacgaagaccgaattgtcagagtagaattttttggagacgagatcgac
gcgattcgatatgtcgatccggtgacgggggaaatccttcagagtttggaagcgttgaat
atttacccagcgcgacactttgtcactccagaagaccagttagaatttgcactggaagcg
atcgcggcagaactaaaacagcgtaaagccgaattagaagcagagaataagttactagaa
gcacaacgcattgaccagcggacgcgctatgacttagaaatgttgcgtgaagtcggctac
tgtaatggcgtagaaaactattcccgtcacctagcgggaagacaagcaggggaaccgcca
gagtgtttgatcgattatttcccgaacgattggctgttggtagtagatgagtctcacgtt
accgtaccccaaattcgggggatgtacaacggcgatcgcgcccgtaagttagtcttgatc
gatcacggtttccgcctacccagcgccgctgacaaccgcccgttaaaatcagaagaattt
tgggcaaaggtgaaccagtgcgtctttgtctccgcaactcctgggaattgggaattagag
gtttcagagggacgagtagtagaacaagtgattcgtcctacaggtgtagtcgatccagaa
attttcgtccgtcctaccgaggggcaaattgacgatcttttaggtgaaattaaacagcgg
gtggatcggcgcgaacggacgctggtaacaaccctgacaaagcgaatggcagaagacctg
acagaatatcttcaagaccacgggattcgcgtccgctacctccactccgagattaattcg
atcgaacggatcgagattttacaagatttgcgcgaaggtagttttgatgtcttggtagga
gtgaacctgttgcgggaaggattggacttacccgaagtctcgctagtggcaattttagac
gcagataaagaaggtttcttgcgggcagagcgatcgctaattcaaactatcggtagggca
gccagaaacgtgcggggacaggcgattttgtacgccgataacctcacagatagcatggca
aaggcgatctcggaaacagaacgacgacgggcaattcaaatcgaatataacgaaaagcac
gggattacgccccagcagatcgtgaaaaaatcgagtaacgcgattttatccttcttagcc
gtgtcgcgtcgtttaaacgcccaagaattagaaactgtttacgaacaagccagcgattta
cccttagaacagattccagaattaattacccaactggaagcacagatgaaagaagcagca
aaaaatctagaatttgaagaggcagcaaaatatcgcgatcgcatcaagcatttgcgggat
aaattgctgggacattaa
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