KEGG   Chroococcidiopsis thermalis: Chro_2572
Entry
Chro_2572         CDS       T02360                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
  KO
K03090  RNA polymerase sigma-B factor
Organism
cthe  Chroococcidiopsis thermalis
Brite
KEGG Orthology (KO) [BR:cthe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cthe03021]
    Chro_2572
Transcription machinery [BR:cthe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Chro_2572
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_r3 HTH_23 Sigma70_ECF HTH_8 HTH_17 Terminase_5 DUF134 AbiEi_4 LacI PhyR_sigma-like HTH_Crp_2 TnsD HTH_10 Xre-like-HTH HTH_Tnp_ISL3 HTH_3 HTH_DeoR HTH_22
Other DBs
NCBI-ProteinID: AFY88048
UniProt: K9U083
LinkDB
Position
complement(2863763..2864524)
AA seq 253 aa
MVVTQTNVYCNEIELLISYYQKPSLWLRNRLVRRHAGLVRQMARQLYHRSPEPYEDLEQI
GYFGLIRAIERFNPDRGYAFSSFAIPYIRGEILHFIRDRAGVVKIPRRWQELHARGQKVY
QQLTSSLGRLPTDLEIARSLHVSLSEWRESQLAIQNCRVFSLDSTLVRESDGQIQLADTI
AERRSCTLQPEEERQQLRFAMNQLEENTRKAVELVFLQQFSRKKAAQYLGVSPMTVTRYL
QKGKQQLFELLQP
NT seq 762 nt   +upstreamnt  +downstreamnt
atggtggtgactcaaactaacgtctactgtaatgagatcgagctgttgatttcttactat
caaaagccttcgctctggttacgcaatcgactggtgagaaggcacgctgggttagtacgc
cagatggcgcgtcaactgtaccatcgctctcccgaaccttatgaagatttagagcagatt
ggatacttcggtttgattcgcgcgatcgagcgctttaatcccgatcgaggatatgctttt
agttcttttgcaattccttatattcgcggtgaaattttacattttatccgcgatcgcgcc
ggagtggtaaaaatcccccgccgctggcaagagcttcacgctcgcgggcaaaaagtttac
caacaattaacttcttctctcggtcgtcttccgacagatttagagattgcgcgatcgctg
cacgtctcgctgtcagaatggagagaaagccaattagccattcaaaattgccgcgtcttc
agtttagatagtacgttggttcgagagtccgatggtcagattcaactagccgataccata
gcagagcgacgttcttgcactttacagccagaagaagagcggcaacaattgcgcttcgct
atgaaccagttggaagaaaatactcgcaaggcagttgaattggtcttcctccagcaattt
tctcgcaaaaaagcagctcaataccttggtgtgagtccgatgactgtcactcgatatcta
caaaaaggcaaacaacagttgtttgagctgttgcaaccctag

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