Chroococcidiopsis thermalis: Chro_2595
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Entry
Chro_2595 CDS
T02360
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cthe
Chroococcidiopsis thermalis
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthe03400
]
Chro_2595
DNA repair and recombination proteins [BR:
cthe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Chro_2595
Archaeal homologous recombinant proteins
Chro_2595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_21
AAA_29
AAA_15
ABC_tran
StiP
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFY88071
UniProt:
K9U0U9
LinkDB
All DBs
Position
2896250..2899276
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLILKNFLSYRETTLDFSGLHIACICGSNGAGKSSLLEAITWAVWGQSRAVAEDDI
IHAGAKEVRVDFLFYSDRHKYRVIRTRYRGQSSSLEFQVETPQGFRSLTEKGVRATQSLI
LEHVKLDYETFINSAYLRQGRADEFMLKRPNERKEILAELLKLRRYDELEERAKDLSKSF
RAQADQLEQALQSLATQLQQQEAIATHLAEIEAQVNQLQQEQAFDDIQLKSLQVIRSQQQ
NWEQQLSFLKQQSQNLTVDRDRLQQEHLAIESQLAAVAEILNREPEIQAGYQHYQDLLGQ
EEEFSTKFQEYSHAQQQHTRLQQQLVQQVNELQRQLQRAEGQLVILQQQEQETQQALSKS
AEVEAGVLQLAAARDRLANLDRLQLQVSPLIQRRNTLQAQIDKVQARLTAKLEELETQQI
TLSQQQSTQSQLQQTATDVAVQIEQLEKDKVYIERVREKGQERRHFLERLQEQQREFEKQ
LGEVEQKIQMLSVPDAVCPLCERPLDEHHWNRVVDKTKEQKRDTEEQFIVVREQLVVTET
EIQELRRRYREVAQKLTQYDALREQRGQVIAQLSASDELQSRLEQIAAEKQHLERSLAQG
DYAADLQTELNQLNSQLQQLNYSEESHALARSEVDKLRWAEVRQAQIKDAQKRQAQIIAR
QPEMRTQIDDLSQQIEQYQVESECAKQIAAIADRIDEIGYDPDRHSTLRTAIRQAQVWQL
SYQQLLSAQEQYPQLEQRSRDLAEAVQARTAERQVLAVQIEEVIQKLEQSPNTTTEIQTL
ESQLAFRRRQLDDRLSQLGRLQQQSQQLAAMQAQQEQQQQQLQVARRQQRVYQELGQAFG
KNGIQALMIENLLPQLEAETNQLLARLSANQLHVQFITQKTGRSGRAAKKNAKTIDTLDI
LIADARGTRPYETYSGGEAFRINFAIRLALARLLAQRAGASLQLLIVDEGFGTQDQEGCD
RLIAAVNAIAADFSCILAVTHMPYFKEAFQARIEVVKTQNGSQLSLSM
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtccaacttatacttaaaaacttcctcagttatcgcgagacgacacttgat
tttagcgggctacatattgcctgtatatgtggctcgaatggggcgggtaaatcatctcta
ctcgaagcgattacctgggcggtttggggtcagagtcgtgctgtagcggaagatgatatc
attcatgccggagcaaaagaagtacgggttgattttctgttttacagcgatcgccacaaa
tatcgcgtgattcgtacccgttaccgaggacaaagcagttccctagagtttcaagtcgaa
acgccacaaggctttcgctcgctaactgaaaagggagtccgagccactcagtcattaatt
ttagaacacgttaagctggactacgaaacatttattaactcagcgtatttgcgtcaggga
cgagctgatgaattcatgctcaagcgccccaacgaacgtaaagaaattttggcggagtta
ctgaaactgcgtcgttatgacgaactagaggaacgggcaaaagatctgtcgaaatctttt
cgcgctcaagccgatcaattagaacaggctttgcaatcgcttgccacccaactacaacaa
caagaagcgatcgccactcatctagcagaaattgaagctcaagtcaaccagttgcagcag
gaacaagcttttgatgacattcaactcaaaagcttacaagtcattcgcagtcaacaacaa
aactgggaacaacaattaagtttcctcaaacagcagtctcaaaatctaacggtggatcgc
gatcgcctccaacaagagcatttagcgatcgagtctcaactggcagctgtagcagagatt
ttaaatcgagagccggaaattcaagccggataccaacactatcaagatctcttagggcag
gaagaagaattcagcactaaatttcaggaatacagccacgcccaacaacagcacactcga
ttacagcaacaactcgtacagcaagtcaacgaacttcagcgccaattacaacgtgctgaa
ggtcagctagttattttacaacagcaagaacaggaaactcaacaagctctgagcaaatcg
gcggaagtagaagcaggagtcttacaactcgccgccgcccgcgatcgcttggcaaattta
gatcggctgcaactccaagtttctcctttgatccagcggcgtaataccctgcaagctcaa
attgataaagtccaagcgcggttaactgccaaactagaagaactggaaacgcaacaaatt
accttgagccagcagcaatcgactcagtcacagctacaacaaactgcgacagacgtagca
gtccaaatcgagcagctagagaaagataaagtctatatcgaacgggtacgggaaaaagga
caggaacgccgccattttttagaacgcctgcaagagcaacaacgagaatttgaaaagcaa
ttaggagaagtcgagcaaaaaattcagatgctctccgtaccagatgcggtgtgtcccttg
tgtgagcgtcctttggacgaacatcattggaatcgcgtcgtagacaaaactaaagaacag
aaaagggatactgaagaacaatttatagttgtccgagaacagttggtagtcacggaaact
gaaattcaagaactgcgacgacgatatcgggaagtcgcgcagaaactcacccaatacgat
gctttacgagagcaacggggacaagtcatcgcgcaactatctgctagcgatgagttgcaa
agtcgcttagaacaaattgcagcagaaaaacaacacctagagcgatcgctagctcaggga
gactacgctgccgatttacaaacagaattaaatcaactcaattcccaacttcagcaactc
aactacagcgaagaaagccatgctttggcgcggagtgaggtcgataaattgcgatgggca
gaagtgcgacaggcacaaattaaagatgctcaaaagcgacaggcacaaattatcgcccga
cagccggaaatgagaacgcaaattgacgatttgtctcagcaaatcgagcaataccaagtt
gagtctgaatgtgccaaacaaatagccgcgatcgccgatcgcatcgacgaaatcggttac
gatccggatcgacacagcaccctaagaacggcaattcgacaagcccaagtgtggcaattg
agctatcaacaactactctcagctcaagaacagtatcctcaactagagcagcgatcgcgc
gatttagctgaagccgtacaagctagaactgccgaacgccaagttcttgcggttcaaatt
gaagaagtgattcaaaagttagaacagtctcccaataccacaactgaaattcaaactcta
gaatcacaattggcgtttcgtcgccgccaactcgacgatcgcctcagtcagttaggacgc
ttgcagcagcaatctcagcaattagccgcgatgcaagctcagcaggaacaacagcagcaa
caactccaagttgctcgtcggcaacagcgagtttatcaagaattagggcaggcgtttggc
aaaaacggcattcaagcgctgatgattgaaaatctgttacctcaactggaagcagaaacc
aaccaattgttagcgcggctgtctgccaaccagttacacgtccaatttattacccaaaaa
accggacgtagcggacgcgcagcgaaaaaaaatgccaaaacgatcgataccttagatatt
ttaattgccgatgcacggggaaccagaccttacgaaacctactctggcggcgaggcattt
cggatcaattttgccattagactagccctggcgagattgttagcccaaagagcaggagca
tctttacaattattgattgttgatgaggggttcggcacgcaagaccaagaagggtgcgat
cgcctaattgccgccgtcaacgcgatcgctgctgacttttcctgcatcctcgcagtgacg
cacatgccctatttcaaagaagctttccaagcccgcatcgaagtcgtcaagactcaaaat
ggttcgcagttaagtttgtctatgtaa
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