Chroococcidiopsis thermalis: Chro_2960
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Entry
Chro_2960 CDS
T02360
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cthe
Chroococcidiopsis thermalis
Pathway
cthe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Chro_2960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cthe02000
]
Chro_2960
Transporters [BR:
cthe02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Chro_2960
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AFY88427
UniProt:
K9U023
LinkDB
All DBs
Position
complement(3288870..3290066)
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AA seq
398 aa
AA seq
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MDRRSFLFSTGTLLLSQLLAGCNTQERAKLRVQLLKGSLPNQVLQKFRTKMQQTASLEFA
SVEQLSSLFDRLQSWQQNNQKPIEEDWRSQLPLPSWLKPQNPNPANLVTVGDYWLAAAIR
QNLIQPLDPTQLSQWSQLPNRWQELVRRNQAGQFDAKGDVWAAPYRWGYTVIAYNRDKFQ
SLNWKPQDWGDLWREELRDRISLPNHPREVIGLTLKYLGKSYNTENPSQVPDLTVQLNRL
QPQVKLYSSDTYLQPLILGDTWLAVGWSNDIIPVMQRHRQIAAIIPQSGTSLWADLWANP
IQANSDRALEYQWIDFCWQPQIARQILLFGRTNSPIPFQIDPENIQAELRPLLVPNDNIL
DKSEFLRPLTPDAIQQHQALWQEMRGQGAGSREQGKES
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtaggtcgtttttattcagtacgggaacgctattactcagtcagttactcgca
gggtgtaacacccaagaacgagccaaactgcgcgtacaattactcaaaggttcgcttccc
aatcaagtcttgcagaaatttcggacaaagatgcagcagactgctagtctagaattcgcc
tcagtggaacaactgagtagcctattcgatcgcttgcaatcttggcagcaaaacaatcaa
aagccaatagaggaagattggcgatcgcaacttcccctaccttcatggcttaaacctcaa
aatcccaaccctgctaacttagtaactgtgggcgactactggcttgcagcagcaattagg
caaaatctaattcaacctttagatccgacacaactatctcaatggtcgcagttaccgaat
cgatggcaagaattagttaggcgtaaccaagcaggacaatttgacgcaaaaggcgatgtt
tgggctgccccctaccgttggggttatactgtcattgcttacaatcgagataaattccag
tctttaaactggaaaccgcaagactggggagacttatggcgagaagaactgcgcgatcgc
atttccctaccaaaccatccccgcgaggttatcggcttaaccctgaaataccttggcaaa
tcgtataacacggaaaacccgagccaagtcccagatttaaccgtccagttgaatcgcctc
cagccgcaggtcaaactttacagttcggatacttatttgcagccattaattttgggagat
acgtggttagctgtaggctggtcaaacgacatcatccctgtgatgcaacgccaccgtcag
attgcggcgataattccgcagtctggaacttcactgtgggcagatctctgggcaaatccg
atacaggcaaacagcgatcgcgctttagaataccaatggattgatttttgctggcaaccc
cagatcgctcgacaaattctgctctttggtagaacgaattcaccaattcccttccagatc
gatcccgagaacattcaagcagaactacgccctctcctagtaccaaatgataatattctg
gacaaaagcgaatttttgcgccccctaactccagatgcaatacagcagcatcaggctttg
tggcaagaaatgagggggcagggagcagggagcagggagcaggggaaagagagctga
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