Chroococcidiopsis thermalis: Chro_3095
Help
Entry
Chro_3095 CDS
T02360
Name
(GenBank) putative exonuclease, RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cthe
Chroococcidiopsis thermalis
Pathway
cthe03410
Base excision repair
cthe03430
Mismatch repair
cthe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Chro_3095
03430 Mismatch repair
Chro_3095
03440 Homologous recombination
Chro_3095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cthe03400
]
Chro_3095
DNA repair and recombination proteins [BR:
cthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Chro_3095
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Chro_3095
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Chro_3095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AFY88562
UniProt:
K9U0E3
LinkDB
All DBs
Position
complement(3453068..3455575)
Genome browser
AA seq
835 aa
AA seq
DB search
MNVSQPQWIVPTEQPPEWFVQAVREYAPSAGFAAQLLWQRGVQAREELPGYLNPRCYQPA
SPFEFGQEMHLAVERLQIARDRQEKVAIWGDFDADGITSTAVLWDGLGQFFCQHTQLSYY
IPNRLTESHGLNCPGIDLLARDNCKLIVTCDTGSTNVAEILYAKSLGVDAIVTDHHTLPA
ERPPVTAIINPRYFPSEHQLFHLSGVAVAYKLVEALYQFLPNVPRQPLEDLLDLVAIGLI
SDLVQLSGDCRYLAQLGIERMQQDYKQPVQQRRRPGVGRLLEMCQKSGDRPTDISFGLGP
RINAVSRIQGDASFCVQLLTSDDLNLVERLAQETELANTRRKSLQKEVSQQVAQKLKSEI
DLSTTSVIVLVDSQWSPGVLGLVAGQIAQETGRPTILLSTEGEQRDKEDKVDKGDKGDKR
AEEAEGAILATSHQPLATLPTPALARGSARSVGNIDLYQLVKDQAHLLHRFGGHPFAAGL
SIPVENIPLFTAAINQKLRQQGSAIAVPSVQADLVVTVADLGRDLFLELKLLEPCGMGNP
VPKLLIQNCWFENTWHRNQQDWRGNKVQYIKTDFNLRDDSTKTSFPGVWWGHYKDEIPTG
RCDCIVELDYNSFKNKQRYEVRLIAVRTSDSLSLTPHSGLRPASLTPLAPQILDCRGMAI
APVDDTFTGDPSSLVVRTCPTCWDELRVWMRRSQFENKSLVLAWTTPEPVSPPQVWQQLV
GIAKYLCRTGQTVTRVQLSQKLGISDRLLGLGFTALSYLGFYVSFQDRYFHISQEVPWHV
AASTNLYATDAAYMQAIDKFAQAVREEQFQRQYFSTVPLSTIQAHAAQLGVRSEE
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcccagccacaatggatcgtcccaacagaacagcccccagagtggttcgtg
caagcagttagggaatatgcccctagcgcaggatttgcggcacaactgttatggcaaagg
ggagttcaagcgcgagaggagttacctggatatctcaatcctcgctgctatcaacctgct
agcccatttgaatttgggcaagaaatgcacttagcagtagaaagattgcaaattgctcgc
gatcgccaagaaaaagtggcaatttggggtgattttgatgctgatggtatcacttctaca
gcggttttatgggatggattgggacaatttttctgtcaacatacccaactttcctattac
atccccaaccgccttaccgagtcgcacgggttgaactgccctggaatcgatctgcttgcc
cgcgataactgtaagttaatcgtgacttgcgacactggtagcacgaatgttgcagaaatt
ctctatgcgaaatctttgggcgttgatgcgattgtcaccgatcaccacactttacccgca
gaacgtccacctgtgactgcaataattaatccgcgttactttccttcagagcatcaatta
tttcatctatctggggttgcagttgcctacaaacttgtcgaagccttatatcaattttta
ccaaatgtaccgcgacaaccattagaggatttactcgatctcgtcgctattgggttaatt
tccgatttagtacaactgagtggagattgccgttatttagctcaattgggtattgaacgg
atgcaacaggattataaacaaccagttcaacagcgacggcgaccaggagtagggcgatta
ttagaaatgtgtcagaaaagtggcgatcgccccacagatatttctttcggcttgggtccc
cgcatcaacgctgtgagccgaattcaaggtgacgcaagcttttgcgttcaattactgacc
agcgacgatctcaacttagtcgagcgccttgcccaagaaaccgaattggcaaacactcgt
cgcaagtctttacaaaaagaagtttcccagcaagttgcccaaaaactcaagtcagaaatc
gatctctccaccactagcgttatcgttctcgtagattcccaatggtcgcctggagtctta
ggactcgtcgccggacaaattgctcaagaaacgggtcgtcctacgattttgttgagtacg
gaaggggaacaaagggacaaggaggacaaggtagacaagggagacaagggggataagaga
gctgaggaagctgagggagcaattctagccactagtcaccagccactagccactctccca
actcccgcacttgctcgcggttcagctcggtctgtcggtaatatcgatttgtaccagtta
gtgaaagatcaagcgcatttactgcataggtttggcggacatccttttgcggctggatta
agcatacccgttgagaatataccgctatttaccgcagcgattaaccaaaaactccgacag
cagggaagcgcgatcgctgtaccgtccgtacaagcagatctggtggtgacagtagccgat
ttagggagagatttgtttttagaactgaaactactcgaaccctgtggtatgggtaatccc
gtgccaaaactgctgattcaaaattgctggtttgaaaacacttggcatcgcaaccaacaa
gattggcggggaaacaaagtgcaatatatcaaaacagattttaatttgcgggatgactcg
actaaaactagttttcctggtgtgtggtggggacattataaagacgagatcccgactgga
cgctgtgactgtattgtagaactcgactacaactcgttcaaaaataaacaacgttacgaa
gtccgcctcattgccgtccgtacttccgactctttatctctcactcctcactccggactt
cgtcccgcttcgctaacgcccctcgctcctcaaattctcgactgccgtggtatggcgatc
gccccagttgacgatacattcacaggcgatccatcctcgcttgtcgtgcgtacctgtccc
acttgttgggacgagttacgtgtctggatgcggcgatcgcagtttgaaaataagtcttta
gttttggcatggactacacccgaaccagtctcaccaccacaagtctggcaacagttagtc
ggaattgctaaatacctttgccgtaccggacaaacggtgactcgcgtgcaactcagtcaa
aagcttggaattagcgatcgccttttaggattaggatttactgctctttcctacttgggc
ttttatgttagctttcaagaccgctattttcatatttctcaagaagtaccgtggcacgtt
gccgcatctacaaatctctatgctaccgatgccgcttacatgcaagcaatagacaaattt
gcccaagctgtccgagaagaacaattccaacgccagtatttttctacggttcctctctct
accattcaagcccatgccgctcaattaggagtgaggagtgaggagtga
DBGET
integrated database retrieval system
